Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rph3aP47708 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rph3aP47708 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rph3aP47708 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rph3aP47708 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rph3aP47708 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rph3aP47708 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rph3aP47708 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rph3aP47708 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rph3aP47708 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.07□□□□□ -0.48
Rph3aP47708 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rph3aP47708 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rph3aP47708 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Rph3aP47708 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.06□□□□□ -0.48
Rph3aP47708 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.06□□□□□ -0.48
Rph3aP47708 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rph3aP47708 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.06□□□□□ -0.48
Rph3aP47708 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm24548-201ENSMUST00000158650 108 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.06□□□□□ -0.48
Rph3aP47708 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm5904-201ENSMUST00000210286 865 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 Gm18165-201ENSMUST00000217426 928 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.06□□□□□ -0.48
Rph3aP47708 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.06□□□□□ -0.48
Rph3aP47708 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rph3aP47708 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rph3aP47708 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rph3aP47708 Gm12742-201ENSMUST00000117326 410 ntBASIC12.05□□□□□ -0.48
Rph3aP47708 Gm12957-201ENSMUST00000117835 377 ntBASIC12.05□□□□□ -0.48
Rph3aP47708 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.05□□□□□ -0.48
Rph3aP47708 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.05□□□□□ -0.48
Rph3aP47708 Gm19184-201ENSMUST00000196798 928 ntBASIC12.05□□□□□ -0.48
Rph3aP47708 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.05□□□□□ -0.48
Rph3aP47708 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rph3aP47708 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rph3aP47708 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.05□□□□□ -0.48
Rph3aP47708 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rph3aP47708 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rph3aP47708 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.05□□□□□ -0.48
Rph3aP47708 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rph3aP47708 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rph3aP47708 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rph3aP47708 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms