Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.79□□□□□ -0.52
Nkx2-6P43688 Gm8913-201ENSMUST00000209491 641 ntBASIC11.79□□□□□ -0.52
Nkx2-6P43688 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-6P43688 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.79□□□□□ -0.52
Nkx2-6P43688 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Gm14208-201ENSMUST00000119645 678 ntBASIC11.78□□□□□ -0.52
Nkx2-6P43688 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.78□□□□□ -0.52
Nkx2-6P43688 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.78□□□□□ -0.52
Nkx2-6P43688 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Gm45598-202ENSMUST00000210719 986 ntBASIC11.78□□□□□ -0.52
Nkx2-6P43688 Gm39404-201ENSMUST00000216350 313 ntBASIC11.78□□□□□ -0.52
Nkx2-6P43688 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.78□□□□□ -0.52
Nkx2-6P43688 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Gm8385-201ENSMUST00000058999 643 ntBASIC11.78□□□□□ -0.52
Nkx2-6P43688 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-6P43688 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-6P43688 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.77□□□□□ -0.52
Nkx2-6P43688 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-6P43688 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-6P43688 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-6P43688 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Nkx2-6P43688 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-6P43688 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.77□□□□□ -0.52
Nkx2-6P43688 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-6P43688 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-6P43688 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-6P43688 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Gm12566-201ENSMUST00000121479 359 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms