Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sox18P43680 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox18P43680 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sox18P43680 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox18P43680 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Sox18P43680 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox18P43680 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sox18P43680 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Gm11652-201ENSMUST00000117842 1267 ntBASIC12.08□□□□□ -0.48
Sox18P43680 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.08□□□□□ -0.48
Sox18P43680 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.08□□□□□ -0.48
Sox18P43680 Gm7666-201ENSMUST00000146631 819 ntBASIC12.08□□□□□ -0.48
Sox18P43680 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.08□□□□□ -0.48
Sox18P43680 Gm9358-201ENSMUST00000183067 927 ntBASIC12.08□□□□□ -0.48
Sox18P43680 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sox18P43680 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Sox18P43680 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox18P43680 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.08□□□□□ -0.48
Sox18P43680 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox18P43680 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Sox18P43680 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox18P43680 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.08□□□□□ -0.48
Sox18P43680 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Sox18P43680 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox18P43680 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sox18P43680 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sox18P43680 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox18P43680 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sox18P43680 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.07□□□□□ -0.48
Sox18P43680 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Sox18P43680 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.07□□□□□ -0.48
Sox18P43680 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox18P43680 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC12.07□□□□□ -0.48
Sox18P43680 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Sox18P43680 Gm27627-201ENSMUST00000183644 150 ntBASIC12.07□□□□□ -0.48
Sox18P43680 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Gm18692-201ENSMUST00000193047 511 ntBASIC12.07□□□□□ -0.48
Sox18P43680 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.07□□□□□ -0.48
Sox18P43680 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox18P43680 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox18P43680 Gm272-201ENSMUST00000222073 919 ntBASIC12.07□□□□□ -0.48
Sox18P43680 AC154838.2-201ENSMUST00000226602 747 ntBASIC12.07□□□□□ -0.48
Sox18P43680 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.07□□□□□ -0.48
Sox18P43680 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sox18P43680 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox18P43680 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sox18P43680 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.07□□□□□ -0.48
Sox18P43680 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Sox18P43680 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms