Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cdkn1aP39689 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn1aP39689 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn1aP39689 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn1aP39689 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn1aP39689 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cdkn1aP39689 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn1aP39689 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn1aP39689 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cdkn1aP39689 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cdkn1aP39689 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.27□□□□□ -0.76
Cdkn1aP39689 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cdkn1aP39689 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
Cdkn1aP39689 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cdkn1aP39689 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Cdkn1aP39689 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cdkn1aP39689 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.27□□□□□ -0.76
Cdkn1aP39689 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.27□□□□□ -0.76
Cdkn1aP39689 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm5070-201ENSMUST00000177599 862 ntBASIC10.27□□□□□ -0.77
Cdkn1aP39689 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm18304-201ENSMUST00000189162 546 ntBASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm37466-201ENSMUST00000195692 652 ntBASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm42937-201ENSMUST00000197360 752 ntBASIC10.27□□□□□ -0.77
Cdkn1aP39689 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm5363-201ENSMUST00000211927 938 ntBASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.27□□□□□ -0.77
Cdkn1aP39689 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.27□□□□□ -0.77
Cdkn1aP39689 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cdkn1aP39689 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.26□□□□□ -0.77
Cdkn1aP39689 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.26□□□□□ -0.77
Cdkn1aP39689 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.26□□□□□ -0.77
Cdkn1aP39689 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.26□□□□□ -0.77
Cdkn1aP39689 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.26□□□□□ -0.77
Cdkn1aP39689 Gm45186-201ENSMUST00000206874 478 ntBASIC10.26□□□□□ -0.77
Cdkn1aP39689 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.26□□□□□ -0.77
Cdkn1aP39689 Gm45224-201ENSMUST00000208203 414 ntBASIC10.26□□□□□ -0.77
Cdkn1aP39689 Gm18212-201ENSMUST00000211678 889 ntBASIC10.26□□□□□ -0.77
Cdkn1aP39689 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms