Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Upk2P38575 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Gm10434-201ENSMUST00000101158 471 ntBASIC10.9□□□□□ -0.66
Upk2P38575 Gm6023-201ENSMUST00000118217 606 ntBASIC10.9□□□□□ -0.66
Upk2P38575 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.9□□□□□ -0.66
Upk2P38575 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.9□□□□□ -0.66
Upk2P38575 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Upk2P38575 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.9□□□□□ -0.66
Upk2P38575 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.9□□□□□ -0.66
Upk2P38575 Gm39404-201ENSMUST00000216350 313 ntBASIC10.9□□□□□ -0.66
Upk2P38575 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.9□□□□□ -0.66
Upk2P38575 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Upk2P38575 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Upk2P38575 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Upk2P38575 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Upk2P38575 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Upk2P38575 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Upk2P38575 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk2P38575 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Upk2P38575 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
Upk2P38575 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Upk2P38575 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Upk2P38575 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Upk2P38575 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Upk2P38575 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Upk2P38575 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Upk2P38575 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Upk2P38575 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Upk2P38575 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.89□□□□□ -0.67
Upk2P38575 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.89□□□□□ -0.67
Upk2P38575 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Upk2P38575 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.89□□□□□ -0.67
Upk2P38575 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.89□□□□□ -0.67
Upk2P38575 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.89□□□□□ -0.67
Upk2P38575 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.89□□□□□ -0.67
Upk2P38575 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.89□□□□□ -0.67
Upk2P38575 Gm18062-201ENSMUST00000208020 547 ntBASIC10.89□□□□□ -0.67
Upk2P38575 Gm18055-201ENSMUST00000208254 547 ntBASIC10.89□□□□□ -0.67
Upk2P38575 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.89□□□□□ -0.67
Upk2P38575 Gm19309-201ENSMUST00000218295 205 ntBASIC10.89□□□□□ -0.67
Upk2P38575 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.89□□□□□ -0.67
Upk2P38575 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Upk2P38575 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Upk2P38575 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Upk2P38575 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk2P38575 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.89□□□□□ -0.67
Upk2P38575 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk2P38575 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk2P38575 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.88□□□□□ -0.67
Upk2P38575 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk2P38575 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk2P38575 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.88□□□□□ -0.67
Upk2P38575 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk2P38575 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.88□□□□□ -0.67
Upk2P38575 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Upk2P38575 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.88□□□□□ -0.67
Upk2P38575 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms