Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vcam1P29533 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Vcam1P29533 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.24□□□□□ -0.13
Vcam1P29533 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.24□□□□□ -0.13
Vcam1P29533 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.24□□□□□ -0.13
Vcam1P29533 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.24□□□□□ -0.13
Vcam1P29533 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Gm8343-201ENSMUST00000182705 994 ntBASIC14.24□□□□□ -0.13
Vcam1P29533 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.24□□□□□ -0.13
Vcam1P29533 Gm43184-201ENSMUST00000197247 542 ntBASIC14.24□□□□□ -0.13
Vcam1P29533 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.24□□□□□ -0.13
Vcam1P29533 Gm45770-201ENSMUST00000212105 616 ntBASIC14.24□□□□□ -0.13
Vcam1P29533 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.24□□□□□ -0.13
Vcam1P29533 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.24□□□□□ -0.13
Vcam1P29533 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.24□□□□□ -0.13
Vcam1P29533 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vcam1P29533 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.24□□□□□ -0.13
Vcam1P29533 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcam1P29533 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.23□□□□□ -0.13
Vcam1P29533 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.23□□□□□ -0.13
Vcam1P29533 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vcam1P29533 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Gm11511-201ENSMUST00000118146 540 ntBASIC14.23□□□□□ -0.13
Vcam1P29533 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.23□□□□□ -0.13
Vcam1P29533 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.23□□□□□ -0.13
Vcam1P29533 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Vcam1P29533 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Vcam1P29533 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Vcam1P29533 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.23□□□□□ -0.13
Vcam1P29533 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.23□□□□□ -0.13
Vcam1P29533 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.23□□□□□ -0.13
Vcam1P29533 Gm4157-201ENSMUST00000211647 679 ntBASIC14.23□□□□□ -0.13
Vcam1P29533 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.23□□□□□ -0.13
Vcam1P29533 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Vcam1P29533 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vcam1P29533 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vcam1P29533 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vcam1P29533 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcam1P29533 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Vcam1P29533 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Vcam1P29533 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.22□□□□□ -0.13
Vcam1P29533 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vcam1P29533 Gm23912-201ENSMUST00000104687 87 ntBASIC14.22□□□□□ -0.13
Vcam1P29533 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vcam1P29533 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms