Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Col8a2P25318 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.38□□□□□ -0.75
Col8a2P25318 Gm14109-201ENSMUST00000118814 309 ntBASIC10.38□□□□□ -0.75
Col8a2P25318 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.38□□□□□ -0.75
Col8a2P25318 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.38□□□□□ -0.75
Col8a2P25318 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.38□□□□□ -0.75
Col8a2P25318 Gm29199-201ENSMUST00000187766 775 ntBASIC10.38□□□□□ -0.75
Col8a2P25318 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Col8a2P25318 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.38□□□□□ -0.75
Col8a2P25318 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
Col8a2P25318 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Col8a2P25318 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Col8a2P25318 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Col8a2P25318 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Col8a2P25318 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Col8a2P25318 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Col8a2P25318 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Col8a2P25318 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.37□□□□□ -0.75
Col8a2P25318 Gm9083-201ENSMUST00000120423 819 ntBASIC10.37□□□□□ -0.75
Col8a2P25318 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Col8a2P25318 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.37□□□□□ -0.75
Col8a2P25318 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.37□□□□□ -0.75
Col8a2P25318 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Col8a2P25318 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.37□□□□□ -0.75
Col8a2P25318 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.37□□□□□ -0.75
Col8a2P25318 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.37□□□□□ -0.75
Col8a2P25318 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.37□□□□□ -0.75
Col8a2P25318 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.37□□□□□ -0.75
Col8a2P25318 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.37□□□□□ -0.75
Col8a2P25318 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.37□□□□□ -0.75
Col8a2P25318 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Col8a2P25318 Gm26035-201ENSMUST00000083065 308 ntBASIC10.37□□□□□ -0.75
Col8a2P25318 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.37□□□□□ -0.75
Col8a2P25318 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Col8a2P25318 Mir433-201ENSMUST00000093564 124 ntBASIC10.37□□□□□ -0.75
Col8a2P25318 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Col8a2P25318 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.37□□□□□ -0.75
Col8a2P25318 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Col8a2P25318 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Col8a2P25318 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col8a2P25318 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms