Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Col1a1P11087 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col1a1P11087 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.4□□□□□ -0.1
Col1a1P11087 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.4□□□□□ -0.1
Col1a1P11087 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.4□□□□□ -0.1
Col1a1P11087 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.4□□□□□ -0.1
Col1a1P11087 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Gm28388-201ENSMUST00000186262 437 ntBASIC14.4□□□□□ -0.1
Col1a1P11087 Gm17877-201ENSMUST00000192578 814 ntBASIC14.4□□□□□ -0.1
Col1a1P11087 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.4□□□□□ -0.1
Col1a1P11087 Gm2875-201ENSMUST00000211333 360 ntBASIC14.4□□□□□ -0.1
Col1a1P11087 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col1a1P11087 Gm19009-201ENSMUST00000223072 823 ntBASIC14.4□□□□□ -0.1
Col1a1P11087 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.4□□□□□ -0.1
Col1a1P11087 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.4□□□□□ -0.1
Col1a1P11087 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col1a1P11087 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col1a1P11087 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.4□□□□□ -0.1
Col1a1P11087 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col1a1P11087 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col1a1P11087 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.39□□□□□ -0.11
Col1a1P11087 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.39□□□□□ -0.11
Col1a1P11087 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col1a1P11087 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.39□□□□□ -0.11
Col1a1P11087 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col1a1P11087 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.39□□□□□ -0.11
Col1a1P11087 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.39□□□□□ -0.11
Col1a1P11087 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.39□□□□□ -0.11
Col1a1P11087 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.39□□□□□ -0.11
Col1a1P11087 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col1a1P11087 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Col1a1P11087 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col1a1P11087 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col1a1P11087 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.39□□□□□ -0.11
Col1a1P11087 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.39□□□□□ -0.11
Col1a1P11087 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.39□□□□□ -0.11
Col1a1P11087 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col1a1P11087 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Col1a1P11087 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.38□□□□□ -0.11
Col1a1P11087 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.38□□□□□ -0.11
Col1a1P11087 Gm42657-201ENSMUST00000201746 211 ntBASIC14.38□□□□□ -0.11
Col1a1P11087 Gm44158-201ENSMUST00000203881 505 ntBASIC14.38□□□□□ -0.11
Col1a1P11087 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col1a1P11087 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.38□□□□□ -0.11
Col1a1P11087 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col1a1P11087 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.38□□□□□ -0.11
Col1a1P11087 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.38□□□□□ -0.11
Col1a1P11087 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col1a1P11087 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col1a1P11087 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms