Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.03■□□□□ 0.16
Hoxc9P09633 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Hoxc9P09633 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.03■□□□□ 0.16
Hoxc9P09633 Gm9387-201ENSMUST00000098624 1320 ntBASIC16.03■□□□□ 0.16
Hoxc9P09633 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Hoxc9P09633 Gm23912-201ENSMUST00000104687 87 ntBASIC16.03■□□□□ 0.16
Hoxc9P09633 Gm15573-201ENSMUST00000119487 540 ntBASIC16.03■□□□□ 0.16
Hoxc9P09633 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC16.03■□□□□ 0.16
Hoxc9P09633 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Gm18041-201ENSMUST00000218210 618 ntBASIC16.03■□□□□ 0.16
Hoxc9P09633 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Gm5705-201ENSMUST00000066241 711 ntBASIC16.03■□□□□ 0.16
Hoxc9P09633 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 AC130671.2-201ENSMUST00000227224 1621 ntBASIC16.03■□□□□ 0.16
Hoxc9P09633 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Hoxc9P09633 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC16.03■□□□□ 0.16
Hoxc9P09633 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Hoxc9P09633 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc9P09633 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Gm14150-201ENSMUST00000122404 1354 ntBASIC16.02■□□□□ 0.16
Hoxc9P09633 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
Hoxc9P09633 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Hoxc9P09633 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC16.02■□□□□ 0.16
Hoxc9P09633 Gm14460-201ENSMUST00000121511 639 ntBASIC16.02■□□□□ 0.16
Hoxc9P09633 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC16.02■□□□□ 0.16
Hoxc9P09633 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC16.02■□□□□ 0.16
Hoxc9P09633 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Hoxc9P09633 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC16.02■□□□□ 0.16
Hoxc9P09633 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Hoxc9P09633 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC16.02■□□□□ 0.16
Hoxc9P09633 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC16.02■□□□□ 0.16
Hoxc9P09633 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC16.02■□□□□ 0.16
Hoxc9P09633 Gm7395-201ENSMUST00000216059 1045 ntBASIC16.02■□□□□ 0.16
Hoxc9P09633 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Hoxc9P09633 AC121960.1-201ENSMUST00000227982 564 ntBASIC16.02■□□□□ 0.16
Hoxc9P09633 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hoxc9P09633 Gm43267-201ENSMUST00000199664 1796 ntBASIC16.02■□□□□ 0.15
Hoxc9P09633 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hoxc9P09633 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hoxc9P09633 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hoxc9P09633 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hoxc9P09633 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hoxc9P09633 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hoxc9P09633 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hoxc9P09633 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Hoxc9P09633 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Gm44260-201ENSMUST00000204946 2094 ntBASIC16.01■□□□□ 0.15
Hoxc9P09633 Gm37131-201ENSMUST00000192502 1561 ntBASIC16.01■□□□□ 0.15
Hoxc9P09633 Gm10152-201ENSMUST00000193475 1344 ntBASIC16.01■□□□□ 0.15
Hoxc9P09633 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC16.01■□□□□ 0.15
Hoxc9P09633 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Gm13888-201ENSMUST00000119148 422 ntBASIC16.01■□□□□ 0.15
Hoxc9P09633 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC16.01■□□□□ 0.15
Hoxc9P09633 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Gm8365-201ENSMUST00000197334 648 ntBASIC16.01■□□□□ 0.15
Hoxc9P09633 AC159103.1-201ENSMUST00000228325 429 ntBASIC16.01■□□□□ 0.15
Hoxc9P09633 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC16.01■□□□□ 0.15
Hoxc9P09633 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC16.01■□□□□ 0.15
Hoxc9P09633 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Hoxc9P09633 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.01■□□□□ 0.15
Hoxc9P09633 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.01■□□□□ 0.15
Hoxc9P09633 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hoxc9P09633 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hoxc9P09633 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms