Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Hoxa3P02831 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Hoxa3P02831 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.46□□□□□ -0.74
Hoxa3P02831 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.46□□□□□ -0.74
Hoxa3P02831 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Hoxa3P02831 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Hoxa3P02831 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hoxa3P02831 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Gm23270-201ENSMUST00000104055 131 ntBASIC10.45□□□□□ -0.74
Hoxa3P02831 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.45□□□□□ -0.74
Hoxa3P02831 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.45□□□□□ -0.74
Hoxa3P02831 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.45□□□□□ -0.74
Hoxa3P02831 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.45□□□□□ -0.74
Hoxa3P02831 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Hoxa3P02831 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.45□□□□□ -0.74
Hoxa3P02831 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.45□□□□□ -0.74
Hoxa3P02831 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.45□□□□□ -0.74
Hoxa3P02831 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Hoxa3P02831 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hoxa3P02831 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.44□□□□□ -0.74
Hoxa3P02831 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.44□□□□□ -0.74
Hoxa3P02831 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm13736-201ENSMUST00000119272 253 ntBASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm25668-201ENSMUST00000157700 129 ntBASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm26956-201ENSMUST00000182176 986 ntBASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms