Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.82□□□□□ -0.36
CopeO89079 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.82□□□□□ -0.36
CopeO89079 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CopeO89079 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CopeO89079 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Snord83b-201ENSMUST00000104546 94 ntBASIC12.81□□□□□ -0.36
CopeO89079 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.81□□□□□ -0.36
CopeO89079 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.81□□□□□ -0.36
CopeO89079 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.81□□□□□ -0.36
CopeO89079 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.81□□□□□ -0.36
CopeO89079 Gm28911-201ENSMUST00000188837 117 ntBASIC12.81□□□□□ -0.36
CopeO89079 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Gm7287-201ENSMUST00000205267 602 ntBASIC12.81□□□□□ -0.36
CopeO89079 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CopeO89079 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CopeO89079 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.81□□□□□ -0.36
CopeO89079 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopeO89079 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.81□□□□□ -0.36
CopeO89079 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CopeO89079 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CopeO89079 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.8□□□□□ -0.36
CopeO89079 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Rmrp-201ENSMUST00000157463 271 ntBASIC12.8□□□□□ -0.36
CopeO89079 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.8□□□□□ -0.36
CopeO89079 Gm37497-201ENSMUST00000195830 798 ntBASIC12.8□□□□□ -0.36
CopeO89079 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.8□□□□□ -0.36
CopeO89079 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CopeO89079 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.8□□□□□ -0.36
CopeO89079 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.8□□□□□ -0.36
CopeO89079 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.8□□□□□ -0.36
CopeO89079 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CopeO89079 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopeO89079 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms