Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm44551-201ENSMUST00000208804 171 ntBASIC12.95□□□□□ -0.34
Ttc3O88196 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.95□□□□□ -0.34
Ttc3O88196 Gm9797-202ENSMUST00000218003 294 ntBASIC12.95□□□□□ -0.34
Ttc3O88196 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ttc3O88196 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ttc3O88196 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.95□□□□□ -0.34
Ttc3O88196 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.95□□□□□ -0.34
Ttc3O88196 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ttc3O88196 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ttc3O88196 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.94□□□□□ -0.34
Ttc3O88196 Gm12165-201ENSMUST00000117047 342 ntBASIC12.94□□□□□ -0.34
Ttc3O88196 Gm11941-201ENSMUST00000119904 610 ntBASIC12.94□□□□□ -0.34
Ttc3O88196 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.94□□□□□ -0.34
Ttc3O88196 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ttc3O88196 Mir6546-201ENSMUST00000184460 62 ntBASIC12.94□□□□□ -0.34
Ttc3O88196 Gm37835-201ENSMUST00000193305 361 ntBASIC12.94□□□□□ -0.34
Ttc3O88196 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.94□□□□□ -0.34
Ttc3O88196 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.94□□□□□ -0.34
Ttc3O88196 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.94□□□□□ -0.34
Ttc3O88196 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.94□□□□□ -0.34
Ttc3O88196 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ttc3O88196 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ttc3O88196 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Gm22133-201ENSMUST00000102082 109 ntBASIC12.94□□□□□ -0.34
Ttc3O88196 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.94□□□□□ -0.34
Ttc3O88196 Gm11509-201ENSMUST00000117358 325 ntBASIC12.94□□□□□ -0.34
Ttc3O88196 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.94□□□□□ -0.34
Ttc3O88196 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.94□□□□□ -0.34
Ttc3O88196 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.94□□□□□ -0.34
Ttc3O88196 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Ttc3O88196 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ttc3O88196 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.93□□□□□ -0.34
Ttc3O88196 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.93□□□□□ -0.34
Ttc3O88196 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.93□□□□□ -0.34
Ttc3O88196 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.93□□□□□ -0.34
Ttc3O88196 Gm19459-201ENSMUST00000176240 835 ntBASIC12.93□□□□□ -0.34
Ttc3O88196 Gm5523-201ENSMUST00000180415 997 ntBASIC12.93□□□□□ -0.34
Ttc3O88196 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.93□□□□□ -0.34
Ttc3O88196 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Gm44882-201ENSMUST00000205702 802 ntBASIC12.93□□□□□ -0.34
Ttc3O88196 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ttc3O88196 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.93□□□□□ -0.34
Ttc3O88196 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ttc3O88196 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ttc3O88196 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms