Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pknox1O70477 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pknox1O70477 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pknox1O70477 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.36□□□□□ -0.43
Pknox1O70477 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.36□□□□□ -0.43
Pknox1O70477 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Rmrp-201ENSMUST00000157463 271 ntBASIC12.36□□□□□ -0.43
Pknox1O70477 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pknox1O70477 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.36□□□□□ -0.43
Pknox1O70477 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.36□□□□□ -0.43
Pknox1O70477 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.36□□□□□ -0.43
Pknox1O70477 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pknox1O70477 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.36□□□□□ -0.43
Pknox1O70477 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pknox1O70477 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pknox1O70477 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Pknox1O70477 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pknox1O70477 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Gm13492-201ENSMUST00000119772 665 ntBASIC12.35□□□□□ -0.43
Pknox1O70477 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Pknox1O70477 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.35□□□□□ -0.43
Pknox1O70477 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pknox1O70477 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Pknox1O70477 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pknox1O70477 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Pknox1O70477 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pknox1O70477 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pknox1O70477 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.34□□□□□ -0.43
Pknox1O70477 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pknox1O70477 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Gm11964-201ENSMUST00000120982 444 ntBASIC12.34□□□□□ -0.43
Pknox1O70477 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.34□□□□□ -0.43
Pknox1O70477 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.34□□□□□ -0.43
Pknox1O70477 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.34□□□□□ -0.43
Pknox1O70477 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.34□□□□□ -0.43
Pknox1O70477 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.34□□□□□ -0.43
Pknox1O70477 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.34□□□□□ -0.43
Pknox1O70477 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Pknox1O70477 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.34□□□□□ -0.43
Pknox1O70477 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pknox1O70477 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pknox1O70477 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms