Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm12208-201ENSMUST00000122004 163 ntBASIC13.68□□□□□ -0.22
Trdmt1O55055 Gm8343-201ENSMUST00000182705 994 ntBASIC13.68□□□□□ -0.22
Trdmt1O55055 Gm27530-201ENSMUST00000184096 98 ntBASIC13.68□□□□□ -0.22
Trdmt1O55055 Gm4157-201ENSMUST00000211647 679 ntBASIC13.68□□□□□ -0.22
Trdmt1O55055 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.68□□□□□ -0.22
Trdmt1O55055 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.68□□□□□ -0.22
Trdmt1O55055 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.68□□□□□ -0.22
Trdmt1O55055 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trdmt1O55055 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.68□□□□□ -0.22
Trdmt1O55055 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.68□□□□□ -0.22
Trdmt1O55055 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm26286-201ENSMUST00000104166 134 ntBASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm24891-201ENSMUST00000104391 136 ntBASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm11509-201ENSMUST00000117358 325 ntBASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm14724-201ENSMUST00000118400 537 ntBASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm15782-201ENSMUST00000121073 445 ntBASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.67□□□□□ -0.22
Trdmt1O55055 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm8100-201ENSMUST00000182906 988 ntBASIC13.67□□□□□ -0.22
Trdmt1O55055 Mir6546-201ENSMUST00000184460 62 ntBASIC13.67□□□□□ -0.22
Trdmt1O55055 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trdmt1O55055 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trdmt1O55055 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trdmt1O55055 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.67□□□□□ -0.22
Trdmt1O55055 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trdmt1O55055 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.67□□□□□ -0.22
Trdmt1O55055 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trdmt1O55055 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trdmt1O55055 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trdmt1O55055 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 Gm12857-201ENSMUST00000117678 592 ntBASIC13.66□□□□□ -0.22
Trdmt1O55055 Gm11511-201ENSMUST00000118146 540 ntBASIC13.66□□□□□ -0.22
Trdmt1O55055 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.66□□□□□ -0.22
Trdmt1O55055 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.66□□□□□ -0.22
Trdmt1O55055 Gm17391-201ENSMUST00000171036 126 ntBASIC13.66□□□□□ -0.22
Trdmt1O55055 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.66□□□□□ -0.22
Trdmt1O55055 Gm43916-201ENSMUST00000205062 967 ntBASIC13.66□□□□□ -0.22
Trdmt1O55055 Gm6905-201ENSMUST00000205729 511 ntBASIC13.66□□□□□ -0.22
Trdmt1O55055 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trdmt1O55055 Grk6-205ENSMUST00000224653 2976 ntBASIC13.66□□□□□ -0.22
Trdmt1O55055 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.66□□□□□ -0.22
Trdmt1O55055 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trdmt1O55055 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trdmt1O55055 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.65□□□□□ -0.22
Trdmt1O55055 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trdmt1O55055 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trdmt1O55055 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Trdmt1O55055 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Gm2965-201ENSMUST00000198365 343 ntBASIC13.65□□□□□ -0.22
Trdmt1O55055 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.65□□□□□ -0.22
Trdmt1O55055 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trdmt1O55055 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trdmt1O55055 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trdmt1O55055 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms