Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.18□□□□□ -0.3
Itgb3O54890 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.18□□□□□ -0.3
Itgb3O54890 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Itgb3O54890 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Itgb3O54890 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Itgb3O54890 Gm15236-201ENSMUST00000117309 379 ntBASIC13.18□□□□□ -0.3
Itgb3O54890 Gm13665-201ENSMUST00000120830 528 ntBASIC13.18□□□□□ -0.3
Itgb3O54890 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Gm5070-201ENSMUST00000177599 862 ntBASIC13.18□□□□□ -0.3
Itgb3O54890 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.18□□□□□ -0.3
Itgb3O54890 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.18□□□□□ -0.3
Itgb3O54890 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.18□□□□□ -0.3
Itgb3O54890 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.18□□□□□ -0.3
Itgb3O54890 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.18□□□□□ -0.3
Itgb3O54890 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.18□□□□□ -0.3
Itgb3O54890 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Itgb3O54890 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Itgb3O54890 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Itgb3O54890 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Itgb3O54890 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Itgb3O54890 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Itgb3O54890 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Itgb3O54890 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.17□□□□□ -0.3
Itgb3O54890 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.17□□□□□ -0.3
Itgb3O54890 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.17□□□□□ -0.3
Itgb3O54890 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.17□□□□□ -0.3
Itgb3O54890 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Gm24934-201ENSMUST00000103764 111 ntBASIC13.17□□□□□ -0.3
Itgb3O54890 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.17□□□□□ -0.3
Itgb3O54890 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.17□□□□□ -0.3
Itgb3O54890 Gm25700-201ENSMUST00000177693 110 ntBASIC13.17□□□□□ -0.3
Itgb3O54890 Gm2383-201ENSMUST00000181461 807 ntBASIC13.17□□□□□ -0.3
Itgb3O54890 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.17□□□□□ -0.3
Itgb3O54890 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.17□□□□□ -0.3
Itgb3O54890 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.17□□□□□ -0.3
Itgb3O54890 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.17□□□□□ -0.3
Itgb3O54890 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Itgb3O54890 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Itgb3O54890 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.17□□□□□ -0.3
Itgb3O54890 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Itgb3O54890 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.16□□□□□ -0.3
Itgb3O54890 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Itgb3O54890 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms