Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.11□□□□□ -0.63
Alx4O35137 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.1□□□□□ -0.63
Alx4O35137 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.1□□□□□ -0.63
Alx4O35137 Gm27701-201ENSMUST00000184498 110 ntBASIC11.1□□□□□ -0.63
Alx4O35137 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.1□□□□□ -0.63
Alx4O35137 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.1□□□□□ -0.63
Alx4O35137 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.1□□□□□ -0.63
Alx4O35137 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.1□□□□□ -0.63
Alx4O35137 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.1□□□□□ -0.63
Alx4O35137 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.1□□□□□ -0.63
Alx4O35137 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Alx4O35137 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Alx4O35137 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx4O35137 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Alx4O35137 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.09□□□□□ -0.63
Alx4O35137 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Alx4O35137 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.09□□□□□ -0.63
Alx4O35137 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx4O35137 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.09□□□□□ -0.63
Alx4O35137 Gm12859-201ENSMUST00000117834 427 ntBASIC11.09□□□□□ -0.63
Alx4O35137 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.09□□□□□ -0.63
Alx4O35137 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.09□□□□□ -0.63
Alx4O35137 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Alx4O35137 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Gm9022-201ENSMUST00000182482 992 ntBASIC11.09□□□□□ -0.63
Alx4O35137 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.09□□□□□ -0.63
Alx4O35137 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx4O35137 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Alx4O35137 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Alx4O35137 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Alx4O35137 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Alx4O35137 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx4O35137 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Alx4O35137 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Alx4O35137 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms