Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.97□□□□□ -0.33
Ebf3O08791 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.97□□□□□ -0.33
Ebf3O08791 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ebf3O08791 Mir339-201ENSMUST00000083659 96 ntBASIC12.97□□□□□ -0.33
Ebf3O08791 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ebf3O08791 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ebf3O08791 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ebf3O08791 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.96□□□□□ -0.33
Ebf3O08791 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.96□□□□□ -0.33
Ebf3O08791 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ebf3O08791 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Gm12566-201ENSMUST00000121479 359 ntBASIC12.96□□□□□ -0.33
Ebf3O08791 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.96□□□□□ -0.33
Ebf3O08791 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.96□□□□□ -0.33
Ebf3O08791 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.96□□□□□ -0.33
Ebf3O08791 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Ebf3O08791 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.96□□□□□ -0.33
Ebf3O08791 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.96□□□□□ -0.33
Ebf3O08791 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.96□□□□□ -0.33
Ebf3O08791 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.96□□□□□ -0.33
Ebf3O08791 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.96□□□□□ -0.33
Ebf3O08791 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.96□□□□□ -0.33
Ebf3O08791 Gm8385-201ENSMUST00000058999 643 ntBASIC12.96□□□□□ -0.33
Ebf3O08791 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf3O08791 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ebf3O08791 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf3O08791 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Ebf3O08791 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf3O08791 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.96□□□□□ -0.34
Ebf3O08791 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ebf3O08791 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf3O08791 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf3O08791 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf3O08791 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf3O08791 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ebf3O08791 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Ebf3O08791 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.95□□□□□ -0.34
Ebf3O08791 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ebf3O08791 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ebf3O08791 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Ebf3O08791 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ebf3O08791 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Gm27023-201ENSMUST00000182372 285 ntBASIC12.95□□□□□ -0.34
Ebf3O08791 Gm28450-201ENSMUST00000187349 638 ntBASIC12.95□□□□□ -0.34
Ebf3O08791 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Ebf3O08791 Gm44651-201ENSMUST00000207343 372 ntBASIC12.95□□□□□ -0.34
Ebf3O08791 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.95□□□□□ -0.34
Ebf3O08791 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ebf3O08791 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Ebf3O08791 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ebf3O08791 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf3O08791 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms