Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Gm11956-201ENSMUST00000119525 512 ntBASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Gm11660-201ENSMUST00000120955 412 ntBASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
B020004C17RikJ3QP07 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Gm15352-201ENSMUST00000118696 270 ntBASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Gm14247-201ENSMUST00000120950 237 ntBASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Gm23153-201ENSMUST00000175323 313 ntBASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Gm7593-201ENSMUST00000187246 644 ntBASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Gm38210-201ENSMUST00000191944 809 ntBASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Gm2517-201ENSMUST00000215651 348 ntBASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
B020004C17RikJ3QP07 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
B020004C17RikJ3QP07 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
B020004C17RikJ3QP07 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
B020004C17RikJ3QP07 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Gm16397-201ENSMUST00000122201 494 ntBASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Gm23771-201ENSMUST00000178702 110 ntBASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Gm29155-201ENSMUST00000185910 269 ntBASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Gm45575-201ENSMUST00000210283 548 ntBASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
B020004C17RikJ3QP07 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms