Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna9G3X8Z7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna9G3X8Z7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chrna9G3X8Z7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna9G3X8Z7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna9G3X8Z7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna9G3X8Z7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.34□□□□□ -0.27
Chrna9G3X8Z7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna9G3X8Z7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Chrna9G3X8Z7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chrna9G3X8Z7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chrna9G3X8Z7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chrna9G3X8Z7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Chrna9G3X8Z7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Gm24830-201ENSMUST00000102024 166 ntBASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Gm12058-201ENSMUST00000118614 437 ntBASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Gm26232-201ENSMUST00000083360 166 ntBASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna9G3X8Z7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Gm14999-201ENSMUST00000121039 624 ntBASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms