Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim55G3X8Y1 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Gm18889-201ENSMUST00000174284 929 ntBASIC12.77□□□□□ -0.37
Trim55G3X8Y1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim55G3X8Y1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Gm8927-201ENSMUST00000181978 981 ntBASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Gm3222-201ENSMUST00000071282 990 ntBASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.76□□□□□ -0.37
Trim55G3X8Y1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms