Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.99□□□□□ -0.01
NpcdF8VQB8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.98□□□□□ -0.01
NpcdF8VQB8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.98□□□□□ -0.01
NpcdF8VQB8 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Gm14585-201ENSMUST00000120713 634 ntBASIC14.98□□□□□ -0.01
NpcdF8VQB8 Gm11246-201ENSMUST00000120880 345 ntBASIC14.98□□□□□ -0.01
NpcdF8VQB8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.98□□□□□ -0.01
NpcdF8VQB8 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.98□□□□□ -0.01
NpcdF8VQB8 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.98□□□□□ -0.01
NpcdF8VQB8 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.98□□□□□ -0.01
NpcdF8VQB8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.98□□□□□ -0.01
NpcdF8VQB8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NpcdF8VQB8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Gm43962-201ENSMUST00000203898 190 ntBASIC14.97□□□□□ -0.01
NpcdF8VQB8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.97□□□□□ -0.01
NpcdF8VQB8 AC154184.3-201ENSMUST00000225620 1090 ntBASIC14.97□□□□□ -0.01
NpcdF8VQB8 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.97□□□□□ -0.01
NpcdF8VQB8 Mir339-201ENSMUST00000083659 96 ntBASIC14.97□□□□□ -0.01
NpcdF8VQB8 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.97□□□□□ -0.01
NpcdF8VQB8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NpcdF8VQB8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.96□□□□□ -0.01
NpcdF8VQB8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms