Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Gm2991-201ENSMUST00000173338 480 ntBASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Gm44958-201ENSMUST00000203734 736 ntBASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cpsf4lE9Q2N0 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.52□□□□□ -0.72
Cpsf4lE9Q2N0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cpsf4lE9Q2N0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cpsf4lE9Q2N0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cpsf4lE9Q2N0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Gm28882-201ENSMUST00000185504 314 ntBASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cpsf4lE9Q2N0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms