Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gm13549-201ENSMUST00000118339 796 ntBASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gm13022-201ENSMUST00000121181 285 ntBASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gm12030-201ENSMUST00000121917 223 ntBASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gm11354-201ENSMUST00000121974 422 ntBASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gm9136-201ENSMUST00000193368 454 ntBASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 AC102368.1-201ENSMUST00000227161 892 ntBASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hfm1D3Z4R1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Gm17931-201ENSMUST00000208132 634 ntBASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 AC168279.1-201ENSMUST00000214611 382 ntBASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 AC126799.1-201ENSMUST00000221976 246 ntBASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Olfr584-201ENSMUST00000098210 964 ntBASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Gm15784-201ENSMUST00000120260 1462 ntBASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hfm1D3Z4R1 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Gm5621-201ENSMUST00000187303 640 ntBASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Gm35713-201ENSMUST00000210516 199 ntBASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 AC169036.1-201ENSMUST00000227994 296 ntBASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 AC166836.1-201ENSMUST00000219933 1795 ntBASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms