Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm14058-201ENSMUST00000116082 735 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm12501-201ENSMUST00000119163 529 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm9358-201ENSMUST00000183067 927 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm10774-201ENSMUST00000188689 204 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm42937-201ENSMUST00000197360 752 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm21811-201ENSMUST00000096485 930 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm12795-201ENSMUST00000117594 539 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm15881-201ENSMUST00000148792 942 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm25881-201ENSMUST00000157783 103 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Mir7221-201ENSMUST00000184009 72 ntBASIC11.16□□□□□ -0.62
Shank1D3YZU1 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Shank1D3YZU1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.15□□□□□ -0.62
Shank1D3YZU1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.15□□□□□ -0.62
Shank1D3YZU1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gm14644-201ENSMUST00000116671 647 ntBASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gm11340-201ENSMUST00000119226 412 ntBASIC11.15□□□□□ -0.62
Shank1D3YZU1 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Mir1901-201ENSMUST00000122616 78 ntBASIC11.15□□□□□ -0.62
Shank1D3YZU1 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gm9230-201ENSMUST00000188228 532 ntBASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gm4607-201ENSMUST00000206649 577 ntBASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.15□□□□□ -0.62
Shank1D3YZU1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.15□□□□□ -0.62
Shank1D3YZU1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shank1D3YZU1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Shank1D3YZU1 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms