Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.57□□□□□ -0.4
Rrn3B2RS91 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrn3B2RS91 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrn3B2RS91 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.57□□□□□ -0.4
Rrn3B2RS91 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rrn3B2RS91 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrn3B2RS91 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrn3B2RS91 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrn3B2RS91 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Rrn3B2RS91 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rrn3B2RS91 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Gm11964-201ENSMUST00000120982 444 ntBASIC12.56□□□□□ -0.4
Rrn3B2RS91 Gm13342-201ENSMUST00000121055 207 ntBASIC12.56□□□□□ -0.4
Rrn3B2RS91 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Gm8018-201ENSMUST00000173536 789 ntBASIC12.56□□□□□ -0.4
Rrn3B2RS91 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Gm27023-201ENSMUST00000182372 285 ntBASIC12.56□□□□□ -0.4
Rrn3B2RS91 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Gm43822-201ENSMUST00000200285 476 ntBASIC12.56□□□□□ -0.4
Rrn3B2RS91 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Gm8227-201ENSMUST00000223306 571 ntBASIC12.56□□□□□ -0.4
Rrn3B2RS91 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.56□□□□□ -0.4
Rrn3B2RS91 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrn3B2RS91 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.56□□□□□ -0.4
Rrn3B2RS91 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.55□□□□□ -0.4
Rrn3B2RS91 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Gm12058-201ENSMUST00000118614 437 ntBASIC12.55□□□□□ -0.4
Rrn3B2RS91 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Gm26956-201ENSMUST00000182176 986 ntBASIC12.55□□□□□ -0.4
Rrn3B2RS91 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Gm21769-201ENSMUST00000211922 111 ntBASIC12.55□□□□□ -0.4
Rrn3B2RS91 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.55□□□□□ -0.4
Rrn3B2RS91 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.55□□□□□ -0.4
Rrn3B2RS91 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.55□□□□□ -0.4
Rrn3B2RS91 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.55□□□□□ -0.4
Rrn3B2RS91 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.55□□□□□ -0.4
Rrn3B2RS91 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrn3B2RS91 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.54□□□□□ -0.4
Rrn3B2RS91 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.54□□□□□ -0.4
Rrn3B2RS91 Gm15703-201ENSMUST00000120250 880 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms