Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cfap99A0A140LIX9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cfap99A0A140LIX9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cfap99A0A140LIX9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Daam2-202ENSMUST00000224595 1926 ntBASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Gm12058-201ENSMUST00000118614 437 ntBASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cfap99A0A140LIX9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Gm13875-201ENSMUST00000120162 282 ntBASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Gm23363-201ENSMUST00000175024 79 ntBASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Gm8885-201ENSMUST00000189382 598 ntBASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cfap99A0A140LIX9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Gm13813-201ENSMUST00000120998 787 ntBASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms