Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Trav9n-2A0A0G2JDP3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm12384-201ENSMUST00000119228 919 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm11425-201ENSMUST00000119608 498 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm13492-201ENSMUST00000119772 665 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Rmrp-201ENSMUST00000157463 271 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm25927-201ENSMUST00000175058 117 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm18187-201ENSMUST00000196476 984 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm9396-201ENSMUST00000076703 567 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms