Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
H2afb3S4R1G7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb3S4R1G7 Mir6538-201ENSMUST00000183713 110 ntBASIC18.72■□□□□ 0.59
H2afb3S4R1G7 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.72■□□□□ 0.59
H2afb3S4R1G7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
H2afb3S4R1G7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb3S4R1G7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb3S4R1G7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
H2afb3S4R1G7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb3S4R1G7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb3S4R1G7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Gm12366-201ENSMUST00000121722 873 ntBASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.69■□□□□ 0.58
H2afb3S4R1G7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Gm5786-201ENSMUST00000085368 882 ntBASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb3S4R1G7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb3S4R1G7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
H2afb3S4R1G7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb3S4R1G7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb3S4R1G7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb3S4R1G7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb3S4R1G7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb3S4R1G7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
H2afb3S4R1G7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.67■□□□□ 0.58
H2afb3S4R1G7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
H2afb3S4R1G7 Gm10420-201ENSMUST00000121713 882 ntBASIC18.67■□□□□ 0.58
H2afb3S4R1G7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.67■□□□□ 0.58
H2afb3S4R1G7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb3S4R1G7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb3S4R1G7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb3S4R1G7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb3S4R1G7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb3S4R1G7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb3S4R1G7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
H2afb3S4R1G7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.66■□□□□ 0.58
H2afb3S4R1G7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb3S4R1G7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb3S4R1G7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.66■□□□□ 0.58
H2afb3S4R1G7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb3S4R1G7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2afb3S4R1G7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2afb3S4R1G7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2afb3S4R1G7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb3S4R1G7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb3S4R1G7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.64■□□□□ 0.57
H2afb3S4R1G7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb3S4R1G7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.64■□□□□ 0.57
H2afb3S4R1G7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb3S4R1G7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb3S4R1G7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb3S4R1G7 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb3S4R1G7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
H2afb3S4R1G7 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.62■□□□□ 0.57
H2afb3S4R1G7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.62■□□□□ 0.57
H2afb3S4R1G7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
H2afb3S4R1G7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb3S4R1G7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms