Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Phf1Q9Z1B8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phf1Q9Z1B8 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.19■□□□□ 0.66
Phf1Q9Z1B8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phf1Q9Z1B8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.18■□□□□ 0.66
Phf1Q9Z1B8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Phf1Q9Z1B8 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.18■□□□□ 0.66
Phf1Q9Z1B8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Phf1Q9Z1B8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phf1Q9Z1B8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Phf1Q9Z1B8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.18■□□□□ 0.66
Phf1Q9Z1B8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.18■□□□□ 0.66
Phf1Q9Z1B8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Phf1Q9Z1B8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Phf1Q9Z1B8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Phf1Q9Z1B8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.17■□□□□ 0.66
Phf1Q9Z1B8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.17■□□□□ 0.66
Phf1Q9Z1B8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Phf1Q9Z1B8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Phf1Q9Z1B8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phf1Q9Z1B8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phf1Q9Z1B8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Phf1Q9Z1B8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phf1Q9Z1B8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.16■□□□□ 0.66
Phf1Q9Z1B8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.16■□□□□ 0.66
Phf1Q9Z1B8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.16■□□□□ 0.66
Phf1Q9Z1B8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phf1Q9Z1B8 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.16■□□□□ 0.66
Phf1Q9Z1B8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phf1Q9Z1B8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Phf1Q9Z1B8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.15■□□□□ 0.66
Phf1Q9Z1B8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phf1Q9Z1B8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.14■□□□□ 0.65
Phf1Q9Z1B8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
Phf1Q9Z1B8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phf1Q9Z1B8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phf1Q9Z1B8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Phf1Q9Z1B8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phf1Q9Z1B8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.13■□□□□ 0.65
Phf1Q9Z1B8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.13■□□□□ 0.65
Phf1Q9Z1B8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phf1Q9Z1B8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Phf1Q9Z1B8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phf1Q9Z1B8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phf1Q9Z1B8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phf1Q9Z1B8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phf1Q9Z1B8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phf1Q9Z1B8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phf1Q9Z1B8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.12■□□□□ 0.65
Phf1Q9Z1B8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.12■□□□□ 0.65
Phf1Q9Z1B8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phf1Q9Z1B8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phf1Q9Z1B8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.12■□□□□ 0.65
Phf1Q9Z1B8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Phf1Q9Z1B8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Phf1Q9Z1B8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Phf1Q9Z1B8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Phf1Q9Z1B8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.11■□□□□ 0.65
Phf1Q9Z1B8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Phf1Q9Z1B8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Phf1Q9Z1B8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Phf1Q9Z1B8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Phf1Q9Z1B8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.1■□□□□ 0.65
Phf1Q9Z1B8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Phf1Q9Z1B8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Phf1Q9Z1B8 Gm7417-201ENSMUST00000192950 473 ntBASIC19.1■□□□□ 0.65
Phf1Q9Z1B8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Phf1Q9Z1B8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phf1Q9Z1B8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phf1Q9Z1B8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Phf1Q9Z1B8 Gm40881-201ENSMUST00000223397 166 ntBASIC19.09■□□□□ 0.65
Phf1Q9Z1B8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phf1Q9Z1B8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phf1Q9Z1B8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phf1Q9Z1B8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phf1Q9Z1B8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phf1Q9Z1B8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
Phf1Q9Z1B8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Phf1Q9Z1B8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Phf1Q9Z1B8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Phf1Q9Z1B8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Phf1Q9Z1B8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.08■□□□□ 0.64
Phf1Q9Z1B8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Phf1Q9Z1B8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Phf1Q9Z1B8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Phf1Q9Z1B8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Phf1Q9Z1B8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Phf1Q9Z1B8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Phf1Q9Z1B8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Phf1Q9Z1B8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Phf1Q9Z1B8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.07■□□□□ 0.64
Phf1Q9Z1B8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Phf1Q9Z1B8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.07■□□□□ 0.64
Phf1Q9Z1B8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Phf1Q9Z1B8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Phf1Q9Z1B8 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.07■□□□□ 0.64
Phf1Q9Z1B8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Phf1Q9Z1B8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Phf1Q9Z1B8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Phf1Q9Z1B8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms