Protein–RNA interactions for Protein: Q9Z123

Sema4f, Semaphorin-4F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema4fQ9Z123 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sema4fQ9Z123 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sema4fQ9Z123 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sema4fQ9Z123 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sema4fQ9Z123 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Sema4fQ9Z123 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.33■■□□□ 1.01
Sema4fQ9Z123 Gm6139-201ENSMUST00000079261 882 ntBASIC21.33■■□□□ 1.01
Sema4fQ9Z123 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Sema4fQ9Z123 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sema4fQ9Z123 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.32■■□□□ 1
Sema4fQ9Z123 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.32■■□□□ 1
Sema4fQ9Z123 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Sema4fQ9Z123 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.32■■□□□ 1
Sema4fQ9Z123 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sema4fQ9Z123 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sema4fQ9Z123 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Sema4fQ9Z123 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4fQ9Z123 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4fQ9Z123 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4fQ9Z123 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sema4fQ9Z123 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.31■■□□□ 1
Sema4fQ9Z123 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.31■■□□□ 1
Sema4fQ9Z123 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Sema4fQ9Z123 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Sema4fQ9Z123 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4fQ9Z123 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Sema4fQ9Z123 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.31■■□□□ 1
Sema4fQ9Z123 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sema4fQ9Z123 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.31■■□□□ 1
Sema4fQ9Z123 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sema4fQ9Z123 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4fQ9Z123 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4fQ9Z123 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4fQ9Z123 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sema4fQ9Z123 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.3■■□□□ 1
Sema4fQ9Z123 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4fQ9Z123 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sema4fQ9Z123 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4fQ9Z123 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Sema4fQ9Z123 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Sema4fQ9Z123 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sema4fQ9Z123 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.28■■□□□ 1
Sema4fQ9Z123 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Sema4fQ9Z123 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sema4fQ9Z123 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sema4fQ9Z123 Mir7075-201ENSMUST00000184187 82 ntBASIC21.28■■□□□ 1
Sema4fQ9Z123 Gm7143-201ENSMUST00000222811 859 ntBASIC21.28■■□□□ 1
Sema4fQ9Z123 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Sema4fQ9Z123 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Sema4fQ9Z123 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sema4fQ9Z123 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sema4fQ9Z123 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sema4fQ9Z123 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Sema4fQ9Z123 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sema4fQ9Z123 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sema4fQ9Z123 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.27■■□□□ 1
Sema4fQ9Z123 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.27■■□□□ 1
Sema4fQ9Z123 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sema4fQ9Z123 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Sema4fQ9Z123 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Sema4fQ9Z123 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4fQ9Z123 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sema4fQ9Z123 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Sema4fQ9Z123 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sema4fQ9Z123 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sema4fQ9Z123 Gm8495-201ENSMUST00000188740 694 ntBASIC21.25■□□□□ 0.99
Sema4fQ9Z123 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.25■□□□□ 0.99
Sema4fQ9Z123 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sema4fQ9Z123 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Sema4fQ9Z123 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Sema4fQ9Z123 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms