Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cr1Q9Z0D9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cr1Q9Z0D9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cr1Q9Z0D9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.66■□□□□ 0.42
Cx3cr1Q9Z0D9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.66■□□□□ 0.42
Cx3cr1Q9Z0D9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cr1Q9Z0D9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cr1Q9Z0D9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.66■□□□□ 0.42
Cx3cr1Q9Z0D9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cx3cr1Q9Z0D9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cr1Q9Z0D9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cr1Q9Z0D9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cr1Q9Z0D9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cr1Q9Z0D9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cr1Q9Z0D9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cr1Q9Z0D9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cr1Q9Z0D9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cr1Q9Z0D9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cr1Q9Z0D9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cr1Q9Z0D9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.62■□□□□ 0.41
Cx3cr1Q9Z0D9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cr1Q9Z0D9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cr1Q9Z0D9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cr1Q9Z0D9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cr1Q9Z0D9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cr1Q9Z0D9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Cx3cr1Q9Z0D9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.61■□□□□ 0.41
Cx3cr1Q9Z0D9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cx3cr1Q9Z0D9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cr1Q9Z0D9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cr1Q9Z0D9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cr1Q9Z0D9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cx3cr1Q9Z0D9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cx3cr1Q9Z0D9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cx3cr1Q9Z0D9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cr1Q9Z0D9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.59■□□□□ 0.41
Cx3cr1Q9Z0D9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cr1Q9Z0D9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cx3cr1Q9Z0D9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cx3cr1Q9Z0D9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cx3cr1Q9Z0D9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cr1Q9Z0D9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cr1Q9Z0D9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cr1Q9Z0D9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cr1Q9Z0D9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cx3cr1Q9Z0D9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cr1Q9Z0D9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cr1Q9Z0D9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cr1Q9Z0D9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms