Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClcnkaQ9WUB7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClcnkaQ9WUB7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClcnkaQ9WUB7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClcnkaQ9WUB7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClcnkaQ9WUB7 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.19■□□□□ 0.66
ClcnkaQ9WUB7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClcnkaQ9WUB7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.19■□□□□ 0.66
ClcnkaQ9WUB7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
ClcnkaQ9WUB7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClcnkaQ9WUB7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClcnkaQ9WUB7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClcnkaQ9WUB7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClcnkaQ9WUB7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.18■□□□□ 0.66
ClcnkaQ9WUB7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ClcnkaQ9WUB7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClcnkaQ9WUB7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClcnkaQ9WUB7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClcnkaQ9WUB7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ClcnkaQ9WUB7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClcnkaQ9WUB7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClcnkaQ9WUB7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ClcnkaQ9WUB7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ClcnkaQ9WUB7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClcnkaQ9WUB7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClcnkaQ9WUB7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClcnkaQ9WUB7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ClcnkaQ9WUB7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ClcnkaQ9WUB7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClcnkaQ9WUB7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ClcnkaQ9WUB7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.14■□□□□ 0.65
ClcnkaQ9WUB7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.14■□□□□ 0.65
ClcnkaQ9WUB7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClcnkaQ9WUB7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClcnkaQ9WUB7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClcnkaQ9WUB7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClcnkaQ9WUB7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ClcnkaQ9WUB7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClcnkaQ9WUB7 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.13■□□□□ 0.65
ClcnkaQ9WUB7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ClcnkaQ9WUB7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClcnkaQ9WUB7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClcnkaQ9WUB7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.12■□□□□ 0.65
ClcnkaQ9WUB7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ClcnkaQ9WUB7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClcnkaQ9WUB7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ClcnkaQ9WUB7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClcnkaQ9WUB7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClcnkaQ9WUB7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ClcnkaQ9WUB7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClcnkaQ9WUB7 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.11■□□□□ 0.65
ClcnkaQ9WUB7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.11■□□□□ 0.65
ClcnkaQ9WUB7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.11■□□□□ 0.65
ClcnkaQ9WUB7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClcnkaQ9WUB7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.11■□□□□ 0.65
ClcnkaQ9WUB7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.11■□□□□ 0.65
ClcnkaQ9WUB7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClcnkaQ9WUB7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClcnkaQ9WUB7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClcnkaQ9WUB7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClcnkaQ9WUB7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClcnkaQ9WUB7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ClcnkaQ9WUB7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms