Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RpgrQ9R0X5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RpgrQ9R0X5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.03■□□□□ 0.96
RpgrQ9R0X5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RpgrQ9R0X5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RpgrQ9R0X5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RpgrQ9R0X5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.02■□□□□ 0.96
RpgrQ9R0X5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RpgrQ9R0X5 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.02■□□□□ 0.96
RpgrQ9R0X5 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.02■□□□□ 0.96
RpgrQ9R0X5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RpgrQ9R0X5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RpgrQ9R0X5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RpgrQ9R0X5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RpgrQ9R0X5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.01■□□□□ 0.95
RpgrQ9R0X5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RpgrQ9R0X5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RpgrQ9R0X5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RpgrQ9R0X5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RpgrQ9R0X5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RpgrQ9R0X5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RpgrQ9R0X5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RpgrQ9R0X5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RpgrQ9R0X5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RpgrQ9R0X5 Gm45444-201ENSMUST00000211394 898 ntBASIC21■□□□□ 0.95
RpgrQ9R0X5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RpgrQ9R0X5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RpgrQ9R0X5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21■□□□□ 0.95
RpgrQ9R0X5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21■□□□□ 0.95
RpgrQ9R0X5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RpgrQ9R0X5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RpgrQ9R0X5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RpgrQ9R0X5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RpgrQ9R0X5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RpgrQ9R0X5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RpgrQ9R0X5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RpgrQ9R0X5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RpgrQ9R0X5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RpgrQ9R0X5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RpgrQ9R0X5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RpgrQ9R0X5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RpgrQ9R0X5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RpgrQ9R0X5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RpgrQ9R0X5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RpgrQ9R0X5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RpgrQ9R0X5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.97■□□□□ 0.95
RpgrQ9R0X5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RpgrQ9R0X5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RpgrQ9R0X5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RpgrQ9R0X5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RpgrQ9R0X5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RpgrQ9R0X5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RpgrQ9R0X5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RpgrQ9R0X5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RpgrQ9R0X5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RpgrQ9R0X5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RpgrQ9R0X5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RpgrQ9R0X5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RpgrQ9R0X5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RpgrQ9R0X5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RpgrQ9R0X5 Gm43566-201ENSMUST00000196851 808 ntBASIC20.94■□□□□ 0.94
RpgrQ9R0X5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RpgrQ9R0X5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RpgrQ9R0X5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RpgrQ9R0X5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RpgrQ9R0X5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.94■□□□□ 0.94
RpgrQ9R0X5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.94■□□□□ 0.94
RpgrQ9R0X5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RpgrQ9R0X5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RpgrQ9R0X5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms