Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Clcn2Q9R0A1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Clcn2Q9R0A1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Clcn2Q9R0A1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.3■■□□□ 1
Clcn2Q9R0A1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Clcn2Q9R0A1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.29■■□□□ 1
Clcn2Q9R0A1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Clcn2Q9R0A1 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.29■■□□□ 1
Clcn2Q9R0A1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clcn2Q9R0A1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn2Q9R0A1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn2Q9R0A1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn2Q9R0A1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.28■■□□□ 1
Clcn2Q9R0A1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.28■■□□□ 1
Clcn2Q9R0A1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn2Q9R0A1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Clcn2Q9R0A1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn2Q9R0A1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.27■■□□□ 1
Clcn2Q9R0A1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.27■■□□□ 1
Clcn2Q9R0A1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn2Q9R0A1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn2Q9R0A1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn2Q9R0A1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn2Q9R0A1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Clcn2Q9R0A1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Clcn2Q9R0A1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Clcn2Q9R0A1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Clcn2Q9R0A1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Clcn2Q9R0A1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn2Q9R0A1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn2Q9R0A1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Clcn2Q9R0A1 Gm45444-201ENSMUST00000211394 898 ntBASIC21.26■□□□□ 0.99
Clcn2Q9R0A1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Clcn2Q9R0A1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Clcn2Q9R0A1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn2Q9R0A1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn2Q9R0A1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn2Q9R0A1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Clcn2Q9R0A1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn2Q9R0A1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.25■□□□□ 0.99
Clcn2Q9R0A1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.25■□□□□ 0.99
Clcn2Q9R0A1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn2Q9R0A1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.25■□□□□ 0.99
Clcn2Q9R0A1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.25■□□□□ 0.99
Clcn2Q9R0A1 Gm43566-201ENSMUST00000196851 808 ntBASIC21.25■□□□□ 0.99
Clcn2Q9R0A1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn2Q9R0A1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn2Q9R0A1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn2Q9R0A1 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.23■□□□□ 0.99
Clcn2Q9R0A1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn2Q9R0A1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn2Q9R0A1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.23■□□□□ 0.99
Clcn2Q9R0A1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn2Q9R0A1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn2Q9R0A1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn2Q9R0A1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn2Q9R0A1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn2Q9R0A1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn2Q9R0A1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn2Q9R0A1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn2Q9R0A1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn2Q9R0A1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn2Q9R0A1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.21■□□□□ 0.99
Clcn2Q9R0A1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn2Q9R0A1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn2Q9R0A1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn2Q9R0A1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn2Q9R0A1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn2Q9R0A1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Clcn2Q9R0A1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.2■□□□□ 0.98
Clcn2Q9R0A1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Clcn2Q9R0A1 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.2■□□□□ 0.98
Clcn2Q9R0A1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
Clcn2Q9R0A1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn2Q9R0A1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn2Q9R0A1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn2Q9R0A1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms