Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nubp2Q9R061 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nubp2Q9R061 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.43■□□□□ 0.54
Nubp2Q9R061 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nubp2Q9R061 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nubp2Q9R061 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nubp2Q9R061 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nubp2Q9R061 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nubp2Q9R061 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.43■□□□□ 0.54
Nubp2Q9R061 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nubp2Q9R061 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nubp2Q9R061 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nubp2Q9R061 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nubp2Q9R061 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nubp2Q9R061 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nubp2Q9R061 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Nubp2Q9R061 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nubp2Q9R061 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.41■□□□□ 0.54
Nubp2Q9R061 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.41■□□□□ 0.54
Nubp2Q9R061 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nubp2Q9R061 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.41■□□□□ 0.54
Nubp2Q9R061 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nubp2Q9R061 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nubp2Q9R061 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nubp2Q9R061 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nubp2Q9R061 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.41■□□□□ 0.54
Nubp2Q9R061 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nubp2Q9R061 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nubp2Q9R061 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Nubp2Q9R061 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.4■□□□□ 0.54
Nubp2Q9R061 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nubp2Q9R061 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nubp2Q9R061 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.39■□□□□ 0.53
Nubp2Q9R061 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nubp2Q9R061 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nubp2Q9R061 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.39■□□□□ 0.53
Nubp2Q9R061 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nubp2Q9R061 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Nubp2Q9R061 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp2Q9R061 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp2Q9R061 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp2Q9R061 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp2Q9R061 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp2Q9R061 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp2Q9R061 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nubp2Q9R061 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.38■□□□□ 0.53
Nubp2Q9R061 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp2Q9R061 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp2Q9R061 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp2Q9R061 Gm10232-201ENSMUST00000089221 720 ntBASIC18.37■□□□□ 0.53
Nubp2Q9R061 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.37■□□□□ 0.53
Nubp2Q9R061 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nubp2Q9R061 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp2Q9R061 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Nubp2Q9R061 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nubp2Q9R061 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.36■□□□□ 0.53
Nubp2Q9R061 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nubp2Q9R061 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nubp2Q9R061 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.35■□□□□ 0.53
Nubp2Q9R061 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nubp2Q9R061 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp2Q9R061 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp2Q9R061 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Nubp2Q9R061 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp2Q9R061 Rps24-207ENSMUST00000224568 714 ntBASIC18.34■□□□□ 0.53
Nubp2Q9R061 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp2Q9R061 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp2Q9R061 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp2Q9R061 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nubp2Q9R061 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nubp2Q9R061 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nubp2Q9R061 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nubp2Q9R061 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nubp2Q9R061 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Nubp2Q9R061 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms