Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp1Q9R060 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.18■□□□□ 0.5
Nubp1Q9R060 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp1Q9R060 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
Nubp1Q9R060 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp1Q9R060 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.18■□□□□ 0.5
Nubp1Q9R060 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp1Q9R060 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp1Q9R060 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp1Q9R060 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp1Q9R060 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.17■□□□□ 0.5
Nubp1Q9R060 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp1Q9R060 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.17■□□□□ 0.5
Nubp1Q9R060 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp1Q9R060 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp1Q9R060 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.16■□□□□ 0.5
Nubp1Q9R060 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp1Q9R060 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.16■□□□□ 0.5
Nubp1Q9R060 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Nubp1Q9R060 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp1Q9R060 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nubp1Q9R060 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp1Q9R060 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp1Q9R060 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp1Q9R060 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp1Q9R060 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp1Q9R060 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp1Q9R060 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp1Q9R060 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp1Q9R060 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp1Q9R060 Mir7075-201ENSMUST00000184187 82 ntBASIC18.15■□□□□ 0.5
Nubp1Q9R060 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Nubp1Q9R060 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp1Q9R060 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Nubp1Q9R060 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp1Q9R060 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp1Q9R060 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.14■□□□□ 0.49
Nubp1Q9R060 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Nubp1Q9R060 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp1Q9R060 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp1Q9R060 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp1Q9R060 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp1Q9R060 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp1Q9R060 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Gm43137-201ENSMUST00000198052 594 ntBASIC18.13■□□□□ 0.49
Nubp1Q9R060 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp1Q9R060 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp1Q9R060 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp1Q9R060 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp1Q9R060 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
Nubp1Q9R060 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.12■□□□□ 0.49
Nubp1Q9R060 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp1Q9R060 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp1Q9R060 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp1Q9R060 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp1Q9R060 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nubp1Q9R060 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nubp1Q9R060 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nubp1Q9R060 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nubp1Q9R060 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nubp1Q9R060 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.11■□□□□ 0.49
Nubp1Q9R060 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nubp1Q9R060 Gm43017-201ENSMUST00000198296 752 ntBASIC18.11■□□□□ 0.49
Nubp1Q9R060 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.11■□□□□ 0.49
Nubp1Q9R060 Gm9870-201ENSMUST00000063874 645 ntBASIC18.11■□□□□ 0.49
Nubp1Q9R060 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nubp1Q9R060 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nubp1Q9R060 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nubp1Q9R060 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nubp1Q9R060 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nubp1Q9R060 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.1■□□□□ 0.49
Nubp1Q9R060 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.1■□□□□ 0.49
Nubp1Q9R060 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nubp1Q9R060 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nubp1Q9R060 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nubp1Q9R060 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
Nubp1Q9R060 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Nubp1Q9R060 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nubp1Q9R060 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nubp1Q9R060 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nubp1Q9R060 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.09■□□□□ 0.49
Nubp1Q9R060 Gm8493-201ENSMUST00000196881 489 ntBASIC18.09■□□□□ 0.49
Nubp1Q9R060 Gm7291-201ENSMUST00000199147 382 ntBASIC18.09■□□□□ 0.49
Nubp1Q9R060 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.08■□□□□ 0.49
Nubp1Q9R060 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nubp1Q9R060 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.08■□□□□ 0.48
Nubp1Q9R060 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nubp1Q9R060 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.08■□□□□ 0.48
Nubp1Q9R060 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.08■□□□□ 0.48
Nubp1Q9R060 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.08■□□□□ 0.48
Nubp1Q9R060 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms