Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Upf1Q9EPU0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Upf1Q9EPU0 Gm42778-201ENSMUST00000199644 553 ntBASIC24.63■■□□□ 1.53
Upf1Q9EPU0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
Upf1Q9EPU0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Upf1Q9EPU0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.63■■□□□ 1.53
Upf1Q9EPU0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Upf1Q9EPU0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.62■■□□□ 1.53
Upf1Q9EPU0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Upf1Q9EPU0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.62■■□□□ 1.53
Upf1Q9EPU0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Upf1Q9EPU0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC24.62■■□□□ 1.53
Upf1Q9EPU0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC24.62■■□□□ 1.53
Upf1Q9EPU0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Upf1Q9EPU0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.61■■□□□ 1.53
Upf1Q9EPU0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Upf1Q9EPU0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Upf1Q9EPU0 Gm12441-201ENSMUST00000121806 588 ntBASIC24.61■■□□□ 1.53
Upf1Q9EPU0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Upf1Q9EPU0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.61■■□□□ 1.53
Upf1Q9EPU0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC24.61■■□□□ 1.53
Upf1Q9EPU0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Upf1Q9EPU0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Upf1Q9EPU0 AC135963.1-201ENSMUST00000211640 717 ntBASIC24.6■■□□□ 1.53
Upf1Q9EPU0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Upf1Q9EPU0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Upf1Q9EPU0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Upf1Q9EPU0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Upf1Q9EPU0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Upf1Q9EPU0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC24.59■■□□□ 1.53
Upf1Q9EPU0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Upf1Q9EPU0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Upf1Q9EPU0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Upf1Q9EPU0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
Upf1Q9EPU0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
Upf1Q9EPU0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Upf1Q9EPU0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Upf1Q9EPU0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Upf1Q9EPU0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.58■■□□□ 1.53
Upf1Q9EPU0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Upf1Q9EPU0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Upf1Q9EPU0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Upf1Q9EPU0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Upf1Q9EPU0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Upf1Q9EPU0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC24.57■■□□□ 1.52
Upf1Q9EPU0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Upf1Q9EPU0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
Upf1Q9EPU0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Upf1Q9EPU0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Upf1Q9EPU0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.56■■□□□ 1.52
Upf1Q9EPU0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC24.56■■□□□ 1.52
Upf1Q9EPU0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Upf1Q9EPU0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Upf1Q9EPU0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Upf1Q9EPU0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Upf1Q9EPU0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.55■■□□□ 1.52
Upf1Q9EPU0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC24.55■■□□□ 1.52
Upf1Q9EPU0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Upf1Q9EPU0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Upf1Q9EPU0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Upf1Q9EPU0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.54■■□□□ 1.52
Upf1Q9EPU0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC24.54■■□□□ 1.52
Upf1Q9EPU0 Gm20760-201ENSMUST00000179197 648 ntBASIC24.54■■□□□ 1.52
Upf1Q9EPU0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC24.54■■□□□ 1.52
Upf1Q9EPU0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Upf1Q9EPU0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC24.54■■□□□ 1.52
Upf1Q9EPU0 Gm7143-201ENSMUST00000222811 859 ntBASIC24.54■■□□□ 1.52
Upf1Q9EPU0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Upf1Q9EPU0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC24.53■■□□□ 1.52
Upf1Q9EPU0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC24.53■■□□□ 1.52
Upf1Q9EPU0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Upf1Q9EPU0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Upf1Q9EPU0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
Upf1Q9EPU0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Upf1Q9EPU0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
Upf1Q9EPU0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC24.51■■□□□ 1.51
Upf1Q9EPU0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Upf1Q9EPU0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC24.51■■□□□ 1.51
Upf1Q9EPU0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Upf1Q9EPU0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Upf1Q9EPU0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Upf1Q9EPU0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Upf1Q9EPU0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC24.5■■□□□ 1.51
Upf1Q9EPU0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Upf1Q9EPU0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC24.5■■□□□ 1.51
Upf1Q9EPU0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Upf1Q9EPU0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC24.5■■□□□ 1.51
Upf1Q9EPU0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Upf1Q9EPU0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Upf1Q9EPU0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Upf1Q9EPU0 Gm8520-201ENSMUST00000186517 868 ntBASIC24.49■■□□□ 1.51
Upf1Q9EPU0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Upf1Q9EPU0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
Upf1Q9EPU0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Upf1Q9EPU0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Upf1Q9EPU0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Upf1Q9EPU0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC24.48■■□□□ 1.51
Upf1Q9EPU0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Upf1Q9EPU0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Upf1Q9EPU0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms