Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.62■□□□□ 0.73
Hmgn3Q9DCB1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn3Q9DCB1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn3Q9DCB1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn3Q9DCB1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn3Q9DCB1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn3Q9DCB1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn3Q9DCB1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn3Q9DCB1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn3Q9DCB1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn3Q9DCB1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn3Q9DCB1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hmgn3Q9DCB1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn3Q9DCB1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn3Q9DCB1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn3Q9DCB1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hmgn3Q9DCB1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.59■□□□□ 0.73
Hmgn3Q9DCB1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
Hmgn3Q9DCB1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn3Q9DCB1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn3Q9DCB1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn3Q9DCB1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.59■□□□□ 0.73
Hmgn3Q9DCB1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.58■□□□□ 0.73
Hmgn3Q9DCB1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.58■□□□□ 0.73
Hmgn3Q9DCB1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Hmgn3Q9DCB1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgn3Q9DCB1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.58■□□□□ 0.72
Hmgn3Q9DCB1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hmgn3Q9DCB1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgn3Q9DCB1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn3Q9DCB1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn3Q9DCB1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn3Q9DCB1 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.57■□□□□ 0.72
Hmgn3Q9DCB1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
Hmgn3Q9DCB1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn3Q9DCB1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn3Q9DCB1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hmgn3Q9DCB1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hmgn3Q9DCB1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn3Q9DCB1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn3Q9DCB1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn3Q9DCB1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn3Q9DCB1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn3Q9DCB1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn3Q9DCB1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn3Q9DCB1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn3Q9DCB1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn3Q9DCB1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn3Q9DCB1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn3Q9DCB1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn3Q9DCB1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn3Q9DCB1 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.55■□□□□ 0.72
Hmgn3Q9DCB1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn3Q9DCB1 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.55■□□□□ 0.72
Hmgn3Q9DCB1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn3Q9DCB1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn3Q9DCB1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Terc-201ENSMUST00000082862 423 ntBASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Hmgn3Q9DCB1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.52■□□□□ 0.72
Hmgn3Q9DCB1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Hmgn3Q9DCB1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hmgn3Q9DCB1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hmgn3Q9DCB1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hmgn3Q9DCB1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hmgn3Q9DCB1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hmgn3Q9DCB1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms