Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cir1Q9DA19 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cir1Q9DA19 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cir1Q9DA19 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.99■□□□□ 0.47
Cir1Q9DA19 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.99■□□□□ 0.47
Cir1Q9DA19 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cir1Q9DA19 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cir1Q9DA19 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cir1Q9DA19 Gm10420-201ENSMUST00000121713 882 ntBASIC17.98■□□□□ 0.47
Cir1Q9DA19 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cir1Q9DA19 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.98■□□□□ 0.47
Cir1Q9DA19 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cir1Q9DA19 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cir1Q9DA19 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cir1Q9DA19 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cir1Q9DA19 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cir1Q9DA19 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cir1Q9DA19 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cir1Q9DA19 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cir1Q9DA19 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cir1Q9DA19 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cir1Q9DA19 Gm5812-201ENSMUST00000061073 957 ntBASIC17.96■□□□□ 0.47
Cir1Q9DA19 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.96■□□□□ 0.47
Cir1Q9DA19 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.96■□□□□ 0.47
Cir1Q9DA19 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cir1Q9DA19 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cir1Q9DA19 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cir1Q9DA19 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.95■□□□□ 0.46
Cir1Q9DA19 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cir1Q9DA19 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.95■□□□□ 0.46
Cir1Q9DA19 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cir1Q9DA19 Gm5921-201ENSMUST00000075898 882 ntBASIC17.95■□□□□ 0.46
Cir1Q9DA19 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cir1Q9DA19 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cir1Q9DA19 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cir1Q9DA19 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cir1Q9DA19 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Cir1Q9DA19 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cir1Q9DA19 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cir1Q9DA19 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.94■□□□□ 0.46
Cir1Q9DA19 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cir1Q9DA19 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cir1Q9DA19 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cir1Q9DA19 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cir1Q9DA19 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cir1Q9DA19 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cir1Q9DA19 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cir1Q9DA19 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cir1Q9DA19 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.93■□□□□ 0.46
Cir1Q9DA19 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cir1Q9DA19 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cir1Q9DA19 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Cir1Q9DA19 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cir1Q9DA19 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cir1Q9DA19 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.93■□□□□ 0.46
Cir1Q9DA19 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cir1Q9DA19 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.92■□□□□ 0.46
Cir1Q9DA19 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.92■□□□□ 0.46
Cir1Q9DA19 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cir1Q9DA19 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cir1Q9DA19 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cir1Q9DA19 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cir1Q9DA19 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cir1Q9DA19 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cir1Q9DA19 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cir1Q9DA19 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
Cir1Q9DA19 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms