Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.23■□□□□ 0.83
Echdc3Q9D7J9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Echdc3Q9D7J9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Echdc3Q9D7J9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Echdc3Q9D7J9 Gm14523-201ENSMUST00000117260 558 ntBASIC20.21■□□□□ 0.83
Echdc3Q9D7J9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Echdc3Q9D7J9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Echdc3Q9D7J9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Echdc3Q9D7J9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Echdc3Q9D7J9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Echdc3Q9D7J9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Echdc3Q9D7J9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Echdc3Q9D7J9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Echdc3Q9D7J9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Echdc3Q9D7J9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Echdc3Q9D7J9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Echdc3Q9D7J9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Echdc3Q9D7J9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Echdc3Q9D7J9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Echdc3Q9D7J9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Echdc3Q9D7J9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Echdc3Q9D7J9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Echdc3Q9D7J9 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.19■□□□□ 0.82
Echdc3Q9D7J9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Echdc3Q9D7J9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Echdc3Q9D7J9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Echdc3Q9D7J9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Echdc3Q9D7J9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Echdc3Q9D7J9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.18■□□□□ 0.82
Echdc3Q9D7J9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Echdc3Q9D7J9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Echdc3Q9D7J9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Echdc3Q9D7J9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.17■□□□□ 0.82
Echdc3Q9D7J9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Echdc3Q9D7J9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Echdc3Q9D7J9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Echdc3Q9D7J9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Echdc3Q9D7J9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Echdc3Q9D7J9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.16■□□□□ 0.82
Echdc3Q9D7J9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Echdc3Q9D7J9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Echdc3Q9D7J9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.15■□□□□ 0.82
Echdc3Q9D7J9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Echdc3Q9D7J9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.15■□□□□ 0.82
Echdc3Q9D7J9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Echdc3Q9D7J9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Echdc3Q9D7J9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Echdc3Q9D7J9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Echdc3Q9D7J9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Echdc3Q9D7J9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Echdc3Q9D7J9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Echdc3Q9D7J9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Echdc3Q9D7J9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Echdc3Q9D7J9 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.11■□□□□ 0.81
Echdc3Q9D7J9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms