Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Cthrc1Q9D1D6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cthrc1Q9D1D6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cthrc1Q9D1D6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Cthrc1Q9D1D6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.51■□□□□ 0.71
Cthrc1Q9D1D6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cthrc1Q9D1D6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.51■□□□□ 0.71
Cthrc1Q9D1D6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cthrc1Q9D1D6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cthrc1Q9D1D6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.51■□□□□ 0.71
Cthrc1Q9D1D6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cthrc1Q9D1D6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.49■□□□□ 0.71
Cthrc1Q9D1D6 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.49■□□□□ 0.71
Cthrc1Q9D1D6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cthrc1Q9D1D6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cthrc1Q9D1D6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cthrc1Q9D1D6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Cthrc1Q9D1D6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cthrc1Q9D1D6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cthrc1Q9D1D6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cthrc1Q9D1D6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Cthrc1Q9D1D6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cthrc1Q9D1D6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cthrc1Q9D1D6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cthrc1Q9D1D6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cthrc1Q9D1D6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cthrc1Q9D1D6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cthrc1Q9D1D6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cthrc1Q9D1D6 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.47■□□□□ 0.71
Cthrc1Q9D1D6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cthrc1Q9D1D6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cthrc1Q9D1D6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Cthrc1Q9D1D6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.47■□□□□ 0.71
Cthrc1Q9D1D6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.47■□□□□ 0.71
Cthrc1Q9D1D6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cthrc1Q9D1D6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cthrc1Q9D1D6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cthrc1Q9D1D6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cthrc1Q9D1D6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cthrc1Q9D1D6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cthrc1Q9D1D6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cthrc1Q9D1D6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cthrc1Q9D1D6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cthrc1Q9D1D6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cthrc1Q9D1D6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cthrc1Q9D1D6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cthrc1Q9D1D6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cthrc1Q9D1D6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cthrc1Q9D1D6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cthrc1Q9D1D6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cthrc1Q9D1D6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cthrc1Q9D1D6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Cthrc1Q9D1D6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cthrc1Q9D1D6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cthrc1Q9D1D6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cthrc1Q9D1D6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cthrc1Q9D1D6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cthrc1Q9D1D6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cthrc1Q9D1D6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cthrc1Q9D1D6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.43■□□□□ 0.7
Cthrc1Q9D1D6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cthrc1Q9D1D6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cthrc1Q9D1D6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cthrc1Q9D1D6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Etf1-202ENSMUST00000180351 108 ntBASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Gm10399-202ENSMUST00000202768 748 ntBASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cthrc1Q9D1D6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cthrc1Q9D1D6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cthrc1Q9D1D6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms