Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chaf1bQ9D0N7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.55■□□□□ 0.72
Chaf1bQ9D0N7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chaf1bQ9D0N7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chaf1bQ9D0N7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chaf1bQ9D0N7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Chaf1bQ9D0N7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chaf1bQ9D0N7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1bQ9D0N7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1bQ9D0N7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1bQ9D0N7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1bQ9D0N7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1bQ9D0N7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1bQ9D0N7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Chaf1bQ9D0N7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1bQ9D0N7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.54■□□□□ 0.72
Chaf1bQ9D0N7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1bQ9D0N7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1bQ9D0N7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1bQ9D0N7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Chaf1bQ9D0N7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1bQ9D0N7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Chaf1bQ9D0N7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1bQ9D0N7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1bQ9D0N7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.52■□□□□ 0.72
Chaf1bQ9D0N7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1bQ9D0N7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Chaf1bQ9D0N7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1bQ9D0N7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.52■□□□□ 0.71
Chaf1bQ9D0N7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chaf1bQ9D0N7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Chaf1bQ9D0N7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1bQ9D0N7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1bQ9D0N7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Chaf1bQ9D0N7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1bQ9D0N7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1bQ9D0N7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1bQ9D0N7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1bQ9D0N7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1bQ9D0N7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1bQ9D0N7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.5■□□□□ 0.71
Chaf1bQ9D0N7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1bQ9D0N7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.5■□□□□ 0.71
Chaf1bQ9D0N7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Chaf1bQ9D0N7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chaf1bQ9D0N7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chaf1bQ9D0N7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chaf1bQ9D0N7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chaf1bQ9D0N7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chaf1bQ9D0N7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chaf1bQ9D0N7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chaf1bQ9D0N7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chaf1bQ9D0N7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chaf1bQ9D0N7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chaf1bQ9D0N7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chaf1bQ9D0N7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chaf1bQ9D0N7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chaf1bQ9D0N7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Chaf1bQ9D0N7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chaf1bQ9D0N7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms