Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Gm45444-201ENSMUST00000211394 898 ntBASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt2Q9CZN7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.89■□□□□ 0.78
Shmt2Q9CZN7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Shmt2Q9CZN7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt2Q9CZN7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt2Q9CZN7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.89■□□□□ 0.77
Shmt2Q9CZN7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt2Q9CZN7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt2Q9CZN7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt2Q9CZN7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt2Q9CZN7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt2Q9CZN7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt2Q9CZN7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt2Q9CZN7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Shmt2Q9CZN7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.88■□□□□ 0.77
Shmt2Q9CZN7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt2Q9CZN7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt2Q9CZN7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt2Q9CZN7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt2Q9CZN7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Shmt2Q9CZN7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Shmt2Q9CZN7 Gm43566-201ENSMUST00000196851 808 ntBASIC19.85■□□□□ 0.77
Shmt2Q9CZN7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shmt2Q9CZN7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shmt2Q9CZN7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Shmt2Q9CZN7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shmt2Q9CZN7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shmt2Q9CZN7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shmt2Q9CZN7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shmt2Q9CZN7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shmt2Q9CZN7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.84■□□□□ 0.77
Shmt2Q9CZN7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shmt2Q9CZN7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shmt2Q9CZN7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shmt2Q9CZN7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Shmt2Q9CZN7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shmt2Q9CZN7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Shmt2Q9CZN7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shmt2Q9CZN7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shmt2Q9CZN7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shmt2Q9CZN7 Iqck-206ENSMUST00000208658 2891 ntBASIC19.82■□□□□ 0.76
Shmt2Q9CZN7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shmt2Q9CZN7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shmt2Q9CZN7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shmt2Q9CZN7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Shmt2Q9CZN7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shmt2Q9CZN7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shmt2Q9CZN7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.81■□□□□ 0.76
Shmt2Q9CZN7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shmt2Q9CZN7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.8■□□□□ 0.76
Shmt2Q9CZN7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.8■□□□□ 0.76
Shmt2Q9CZN7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shmt2Q9CZN7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Shmt2Q9CZN7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shmt2Q9CZN7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shmt2Q9CZN7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shmt2Q9CZN7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shmt2Q9CZN7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms