Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mrps28Q9CY16 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Mrps28Q9CY16 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mrps28Q9CY16 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mrps28Q9CY16 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrps28Q9CY16 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrps28Q9CY16 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrps28Q9CY16 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.86■□□□□ 0.61
Mrps28Q9CY16 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrps28Q9CY16 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrps28Q9CY16 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrps28Q9CY16 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mrps28Q9CY16 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrps28Q9CY16 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mrps28Q9CY16 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrps28Q9CY16 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.84■□□□□ 0.61
Mrps28Q9CY16 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.84■□□□□ 0.61
Mrps28Q9CY16 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrps28Q9CY16 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrps28Q9CY16 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrps28Q9CY16 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mrps28Q9CY16 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Mrps28Q9CY16 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mrps28Q9CY16 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Mrps28Q9CY16 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Mrps28Q9CY16 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mrps28Q9CY16 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Mrps28Q9CY16 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrps28Q9CY16 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.82■□□□□ 0.6
Mrps28Q9CY16 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrps28Q9CY16 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Mrps28Q9CY16 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrps28Q9CY16 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrps28Q9CY16 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mrps28Q9CY16 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.81■□□□□ 0.6
Mrps28Q9CY16 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.81■□□□□ 0.6
Mrps28Q9CY16 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.81■□□□□ 0.6
Mrps28Q9CY16 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mrps28Q9CY16 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mrps28Q9CY16 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mrps28Q9CY16 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mrps28Q9CY16 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.8■□□□□ 0.6
Mrps28Q9CY16 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mrps28Q9CY16 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.8■□□□□ 0.6
Mrps28Q9CY16 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mrps28Q9CY16 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.79■□□□□ 0.6
Mrps28Q9CY16 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 Gm5812-201ENSMUST00000061073 957 ntBASIC18.79■□□□□ 0.6
Mrps28Q9CY16 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrps28Q9CY16 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Gm10399-202ENSMUST00000202768 748 ntBASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.78■□□□□ 0.6
Mrps28Q9CY16 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mrps28Q9CY16 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.77■□□□□ 0.6
Mrps28Q9CY16 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.77■□□□□ 0.6
Mrps28Q9CY16 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrps28Q9CY16 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrps28Q9CY16 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mrps28Q9CY16 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mrps28Q9CY16 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mrps28Q9CY16 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Mrps28Q9CY16 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrps28Q9CY16 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Mrps28Q9CY16 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.76■□□□□ 0.59
Mrps28Q9CY16 Gm15820-201ENSMUST00000201566 728 ntBASIC18.76■□□□□ 0.59
Mrps28Q9CY16 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrps28Q9CY16 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mrps28Q9CY16 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrps28Q9CY16 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms