Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nip7Q9CXK8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Nip7Q9CXK8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Nip7Q9CXK8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nip7Q9CXK8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nip7Q9CXK8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nip7Q9CXK8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Nip7Q9CXK8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Nip7Q9CXK8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC26.31■■□□□ 1.8
Nip7Q9CXK8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC26.31■■□□□ 1.8
Nip7Q9CXK8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nip7Q9CXK8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nip7Q9CXK8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nip7Q9CXK8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC26.31■■□□□ 1.8
Nip7Q9CXK8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nip7Q9CXK8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC26.29■■□□□ 1.8
Nip7Q9CXK8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nip7Q9CXK8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Nip7Q9CXK8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.29■■□□□ 1.8
Nip7Q9CXK8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Nip7Q9CXK8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nip7Q9CXK8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nip7Q9CXK8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC26.28■■□□□ 1.8
Nip7Q9CXK8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nip7Q9CXK8 Mir7075-201ENSMUST00000184187 82 ntBASIC26.28■■□□□ 1.8
Nip7Q9CXK8 Slc35b2-207ENSMUST00000226086 850 ntBASIC26.28■■□□□ 1.8
Nip7Q9CXK8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nip7Q9CXK8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Nip7Q9CXK8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC26.27■■□□□ 1.8
Nip7Q9CXK8 Gm8495-201ENSMUST00000188740 694 ntBASIC26.27■■□□□ 1.8
Nip7Q9CXK8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
Nip7Q9CXK8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nip7Q9CXK8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Nip7Q9CXK8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nip7Q9CXK8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nip7Q9CXK8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
Nip7Q9CXK8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nip7Q9CXK8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.27■■□□□ 1.8
Nip7Q9CXK8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Nip7Q9CXK8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC26.26■■□□□ 1.79
Nip7Q9CXK8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nip7Q9CXK8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nip7Q9CXK8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Nip7Q9CXK8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Nip7Q9CXK8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.25■■□□□ 1.79
Nip7Q9CXK8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Nip7Q9CXK8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nip7Q9CXK8 Gm18284-201ENSMUST00000172604 624 ntBASIC26.25■■□□□ 1.79
Nip7Q9CXK8 Gm10657-201ENSMUST00000193528 1031 ntBASIC26.25■■□□□ 1.79
Nip7Q9CXK8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nip7Q9CXK8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Nip7Q9CXK8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nip7Q9CXK8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC26.24■■□□□ 1.79
Nip7Q9CXK8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nip7Q9CXK8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nip7Q9CXK8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nip7Q9CXK8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Nip7Q9CXK8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nip7Q9CXK8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Nip7Q9CXK8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
Nip7Q9CXK8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
Nip7Q9CXK8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Nip7Q9CXK8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nip7Q9CXK8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nip7Q9CXK8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Nip7Q9CXK8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
Nip7Q9CXK8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Nip7Q9CXK8 Gm43017-201ENSMUST00000198296 752 ntBASIC26.22■■□□□ 1.79
Nip7Q9CXK8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nip7Q9CXK8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Nip7Q9CXK8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nip7Q9CXK8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nip7Q9CXK8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nip7Q9CXK8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nip7Q9CXK8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC26.21■■□□□ 1.79
Nip7Q9CXK8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nip7Q9CXK8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC26.21■■□□□ 1.79
Nip7Q9CXK8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
Nip7Q9CXK8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nip7Q9CXK8 Gm21168-201ENSMUST00000199646 1096 ntBASIC26.2■■□□□ 1.78
Nip7Q9CXK8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nip7Q9CXK8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC26.2■■□□□ 1.78
Nip7Q9CXK8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nip7Q9CXK8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Nip7Q9CXK8 Gm7143-201ENSMUST00000222811 859 ntBASIC26.19■■□□□ 1.78
Nip7Q9CXK8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nip7Q9CXK8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms