Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Chd1lQ9CXF7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Chd1lQ9CXF7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Chd1lQ9CXF7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Chd1lQ9CXF7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Chd1lQ9CXF7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Chd1lQ9CXF7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Chd1lQ9CXF7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Chd1lQ9CXF7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Chd1lQ9CXF7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Chd1lQ9CXF7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Chd1lQ9CXF7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Chd1lQ9CXF7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Chd1lQ9CXF7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Chd1lQ9CXF7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.62■■□□□ 1.37
Chd1lQ9CXF7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Chd1lQ9CXF7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Chd1lQ9CXF7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Chd1lQ9CXF7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Chd1lQ9CXF7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Chd1lQ9CXF7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
Chd1lQ9CXF7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Chd1lQ9CXF7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Chd1lQ9CXF7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Chd1lQ9CXF7 Gm44428-201ENSMUST00000204474 874 ntBASIC23.6■■□□□ 1.37
Chd1lQ9CXF7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Chd1lQ9CXF7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Chd1lQ9CXF7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chd1lQ9CXF7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Chd1lQ9CXF7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chd1lQ9CXF7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Chd1lQ9CXF7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chd1lQ9CXF7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Chd1lQ9CXF7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chd1lQ9CXF7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chd1lQ9CXF7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chd1lQ9CXF7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chd1lQ9CXF7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chd1lQ9CXF7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chd1lQ9CXF7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chd1lQ9CXF7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chd1lQ9CXF7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
Chd1lQ9CXF7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Chd1lQ9CXF7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Chd1lQ9CXF7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Chd1lQ9CXF7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chd1lQ9CXF7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chd1lQ9CXF7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Chd1lQ9CXF7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Chd1lQ9CXF7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Chd1lQ9CXF7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chd1lQ9CXF7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chd1lQ9CXF7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chd1lQ9CXF7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chd1lQ9CXF7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chd1lQ9CXF7 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.55■■□□□ 1.36
Chd1lQ9CXF7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Chd1lQ9CXF7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.55■■□□□ 1.36
Chd1lQ9CXF7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chd1lQ9CXF7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Chd1lQ9CXF7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Chd1lQ9CXF7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Chd1lQ9CXF7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.54■■□□□ 1.36
Chd1lQ9CXF7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Chd1lQ9CXF7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Chd1lQ9CXF7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.53■■□□□ 1.36
Chd1lQ9CXF7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.53■■□□□ 1.36
Chd1lQ9CXF7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.53■■□□□ 1.36
Chd1lQ9CXF7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Chd1lQ9CXF7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.53■■□□□ 1.36
Chd1lQ9CXF7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Chd1lQ9CXF7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chd1lQ9CXF7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chd1lQ9CXF7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chd1lQ9CXF7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chd1lQ9CXF7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.52■■□□□ 1.36
Chd1lQ9CXF7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.52■■□□□ 1.36
Chd1lQ9CXF7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
Chd1lQ9CXF7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chd1lQ9CXF7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chd1lQ9CXF7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.35
Chd1lQ9CXF7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Chd1lQ9CXF7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chd1lQ9CXF7 Gm11599-201ENSMUST00000118720 878 ntBASIC23.51■■□□□ 1.35
Chd1lQ9CXF7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Chd1lQ9CXF7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chd1lQ9CXF7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chd1lQ9CXF7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chd1lQ9CXF7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Chd1lQ9CXF7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms