Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Gm45364-201ENSMUST00000210883 159 ntBASIC18.91■□□□□ 0.62
Smurf1Q9CUN6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smurf1Q9CUN6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smurf1Q9CUN6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smurf1Q9CUN6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Smurf1Q9CUN6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smurf1Q9CUN6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smurf1Q9CUN6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.9■□□□□ 0.62
Smurf1Q9CUN6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smurf1Q9CUN6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Smurf1Q9CUN6 Golph3-202ENSMUST00000226517 2359 ntBASIC18.9■□□□□ 0.62
Smurf1Q9CUN6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.89■□□□□ 0.61
Smurf1Q9CUN6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smurf1Q9CUN6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.88■□□□□ 0.61
Smurf1Q9CUN6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.88■□□□□ 0.61
Smurf1Q9CUN6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smurf1Q9CUN6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smurf1Q9CUN6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Smurf1Q9CUN6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smurf1Q9CUN6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smurf1Q9CUN6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smurf1Q9CUN6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smurf1Q9CUN6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smurf1Q9CUN6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smurf1Q9CUN6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Smurf1Q9CUN6 Terc-201ENSMUST00000082862 423 ntBASIC18.87■□□□□ 0.61
Smurf1Q9CUN6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smurf1Q9CUN6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smurf1Q9CUN6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smurf1Q9CUN6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.86■□□□□ 0.61
Smurf1Q9CUN6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smurf1Q9CUN6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smurf1Q9CUN6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smurf1Q9CUN6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smurf1Q9CUN6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Smurf1Q9CUN6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smurf1Q9CUN6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smurf1Q9CUN6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smurf1Q9CUN6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Smurf1Q9CUN6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smurf1Q9CUN6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smurf1Q9CUN6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smurf1Q9CUN6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smurf1Q9CUN6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smurf1Q9CUN6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Smurf1Q9CUN6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smurf1Q9CUN6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smurf1Q9CUN6 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.82■□□□□ 0.6
Smurf1Q9CUN6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smurf1Q9CUN6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smurf1Q9CUN6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smurf1Q9CUN6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smurf1Q9CUN6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smurf1Q9CUN6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smurf1Q9CUN6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smurf1Q9CUN6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smurf1Q9CUN6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smurf1Q9CUN6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smurf1Q9CUN6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Smurf1Q9CUN6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smurf1Q9CUN6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smurf1Q9CUN6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms