Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1Q9CQ70 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
H2afb1Q9CQ70 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1Q9CQ70 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1Q9CQ70 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb1Q9CQ70 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
H2afb1Q9CQ70 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
H2afb1Q9CQ70 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1Q9CQ70 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1Q9CQ70 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
H2afb1Q9CQ70 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.09■□□□□ 0.33
H2afb1Q9CQ70 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1Q9CQ70 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1Q9CQ70 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.09■□□□□ 0.33
H2afb1Q9CQ70 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.09■□□□□ 0.33
H2afb1Q9CQ70 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
H2afb1Q9CQ70 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb1Q9CQ70 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb1Q9CQ70 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
H2afb1Q9CQ70 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb1Q9CQ70 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb1Q9CQ70 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb1Q9CQ70 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb1Q9CQ70 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb1Q9CQ70 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.08■□□□□ 0.32
H2afb1Q9CQ70 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb1Q9CQ70 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
H2afb1Q9CQ70 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
H2afb1Q9CQ70 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb1Q9CQ70 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
H2afb1Q9CQ70 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb1Q9CQ70 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1Q9CQ70 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1Q9CQ70 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1Q9CQ70 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.04■□□□□ 0.32
H2afb1Q9CQ70 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1Q9CQ70 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1Q9CQ70 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1Q9CQ70 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
H2afb1Q9CQ70 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1Q9CQ70 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
H2afb1Q9CQ70 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1Q9CQ70 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1Q9CQ70 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.03■□□□□ 0.32
H2afb1Q9CQ70 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1Q9CQ70 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1Q9CQ70 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
H2afb1Q9CQ70 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1Q9CQ70 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
H2afb1Q9CQ70 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
H2afb1Q9CQ70 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1Q9CQ70 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1Q9CQ70 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
H2afb1Q9CQ70 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.02■□□□□ 0.32
H2afb1Q9CQ70 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1Q9CQ70 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1Q9CQ70 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1Q9CQ70 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1Q9CQ70 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1Q9CQ70 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1Q9CQ70 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
H2afb1Q9CQ70 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1Q9CQ70 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1Q9CQ70 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1Q9CQ70 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1Q9CQ70 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
H2afb1Q9CQ70 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.01■□□□□ 0.31
H2afb1Q9CQ70 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.01■□□□□ 0.31
H2afb1Q9CQ70 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.01■□□□□ 0.31
H2afb1Q9CQ70 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1Q9CQ70 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1Q9CQ70 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb1Q9CQ70 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb1Q9CQ70 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb1Q9CQ70 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17■□□□□ 0.31
H2afb1Q9CQ70 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
H2afb1Q9CQ70 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb1Q9CQ70 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms