Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trim16Q99PP9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim16Q99PP9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim16Q99PP9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim16Q99PP9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim16Q99PP9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim16Q99PP9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim16Q99PP9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim16Q99PP9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim16Q99PP9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim16Q99PP9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim16Q99PP9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim16Q99PP9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim16Q99PP9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim16Q99PP9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim16Q99PP9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim16Q99PP9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim16Q99PP9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim16Q99PP9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim16Q99PP9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim16Q99PP9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Trim16Q99PP9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim16Q99PP9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim16Q99PP9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.27■□□□□ 0.84
Trim16Q99PP9 Gm43566-201ENSMUST00000196851 808 ntBASIC20.27■□□□□ 0.84
Trim16Q99PP9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim16Q99PP9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim16Q99PP9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.26■□□□□ 0.83
Trim16Q99PP9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim16Q99PP9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim16Q99PP9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.26■□□□□ 0.83
Trim16Q99PP9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim16Q99PP9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim16Q99PP9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim16Q99PP9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim16Q99PP9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim16Q99PP9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim16Q99PP9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim16Q99PP9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim16Q99PP9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim16Q99PP9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim16Q99PP9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim16Q99PP9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim16Q99PP9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim16Q99PP9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim16Q99PP9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim16Q99PP9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim16Q99PP9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim16Q99PP9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim16Q99PP9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim16Q99PP9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim16Q99PP9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim16Q99PP9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim16Q99PP9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim16Q99PP9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Trim16Q99PP9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim16Q99PP9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.22■□□□□ 0.83
Trim16Q99PP9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim16Q99PP9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim16Q99PP9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim16Q99PP9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim16Q99PP9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Trim16Q99PP9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.21■□□□□ 0.83
Trim16Q99PP9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim16Q99PP9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim16Q99PP9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
Trim16Q99PP9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim16Q99PP9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Trim16Q99PP9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim16Q99PP9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim16Q99PP9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim16Q99PP9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim16Q99PP9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim16Q99PP9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim16Q99PP9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim16Q99PP9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim16Q99PP9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim16Q99PP9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim16Q99PP9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim16Q99PP9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim16Q99PP9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.19■□□□□ 0.82
Trim16Q99PP9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Trim16Q99PP9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim16Q99PP9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim16Q99PP9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim16Q99PP9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim16Q99PP9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim16Q99PP9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim16Q99PP9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms