Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.85■■□□□ 1.09
Col25a1Q99MQ5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col25a1Q99MQ5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col25a1Q99MQ5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col25a1Q99MQ5 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.85■■□□□ 1.09
Col25a1Q99MQ5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Col25a1Q99MQ5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col25a1Q99MQ5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col25a1Q99MQ5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col25a1Q99MQ5 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.84■■□□□ 1.09
Col25a1Q99MQ5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Col25a1Q99MQ5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col25a1Q99MQ5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col25a1Q99MQ5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col25a1Q99MQ5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col25a1Q99MQ5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.83■■□□□ 1.09
Col25a1Q99MQ5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.09
Col25a1Q99MQ5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col25a1Q99MQ5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.83■■□□□ 1.09
Col25a1Q99MQ5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Col25a1Q99MQ5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.82■■□□□ 1.08
Col25a1Q99MQ5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.82■■□□□ 1.08
Col25a1Q99MQ5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.82■■□□□ 1.08
Col25a1Q99MQ5 Gm43173-201ENSMUST00000202246 593 ntBASIC21.82■■□□□ 1.08
Col25a1Q99MQ5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col25a1Q99MQ5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col25a1Q99MQ5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col25a1Q99MQ5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Col25a1Q99MQ5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col25a1Q99MQ5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Col25a1Q99MQ5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col25a1Q99MQ5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col25a1Q99MQ5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col25a1Q99MQ5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col25a1Q99MQ5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.8■■□□□ 1.08
Col25a1Q99MQ5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col25a1Q99MQ5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.79■■□□□ 1.08
Col25a1Q99MQ5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col25a1Q99MQ5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col25a1Q99MQ5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col25a1Q99MQ5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col25a1Q99MQ5 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.78■■□□□ 1.08
Col25a1Q99MQ5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Col25a1Q99MQ5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.78■■□□□ 1.08
Col25a1Q99MQ5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col25a1Q99MQ5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col25a1Q99MQ5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col25a1Q99MQ5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.77■■□□□ 1.08
Col25a1Q99MQ5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Col25a1Q99MQ5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col25a1Q99MQ5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Col25a1Q99MQ5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col25a1Q99MQ5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col25a1Q99MQ5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Col25a1Q99MQ5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.76■■□□□ 1.07
Col25a1Q99MQ5 Gm18671-201ENSMUST00000214826 683 ntBASIC21.76■■□□□ 1.07
Col25a1Q99MQ5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col25a1Q99MQ5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col25a1Q99MQ5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col25a1Q99MQ5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col25a1Q99MQ5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col25a1Q99MQ5 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.75■■□□□ 1.07
Col25a1Q99MQ5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col25a1Q99MQ5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col25a1Q99MQ5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.74■■□□□ 1.07
Col25a1Q99MQ5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col25a1Q99MQ5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.74■■□□□ 1.07
Col25a1Q99MQ5 Gm22240-201ENSMUST00000175225 82 ntBASIC21.74■■□□□ 1.07
Col25a1Q99MQ5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Col25a1Q99MQ5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col25a1Q99MQ5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col25a1Q99MQ5 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.73■■□□□ 1.07
Col25a1Q99MQ5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Col25a1Q99MQ5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col25a1Q99MQ5 Gm10653-202ENSMUST00000139570 835 ntBASIC21.73■■□□□ 1.07
Col25a1Q99MQ5 Gm43060-201ENSMUST00000200621 289 ntBASIC21.73■■□□□ 1.07
Col25a1Q99MQ5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.73■■□□□ 1.07
Col25a1Q99MQ5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.73■■□□□ 1.07
Col25a1Q99MQ5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Col25a1Q99MQ5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.72■■□□□ 1.07
Col25a1Q99MQ5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col25a1Q99MQ5 AV356131-201ENSMUST00000206201 750 ntBASIC21.72■■□□□ 1.07
Col25a1Q99MQ5 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.72■■□□□ 1.07
Col25a1Q99MQ5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col25a1Q99MQ5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Col25a1Q99MQ5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col25a1Q99MQ5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col25a1Q99MQ5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col25a1Q99MQ5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms